Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ACAP3Q96P50 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ACAP3Q96P50 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ACAP3Q96P50 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ACAP3Q96P50 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.59■□□□□ 0.57
ACAP3Q96P50 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.59■□□□□ 0.57
ACAP3Q96P50 AC116353.5-201ENST00000638148 1699 ntBASIC18.59■□□□□ 0.57
ACAP3Q96P50 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACAP3Q96P50 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ACAP3Q96P50 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ACAP3Q96P50 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ACAP3Q96P50 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACAP3Q96P50 EGFEM1P-202ENST00000431685 1563 ntBASIC18.59■□□□□ 0.57
ACAP3Q96P50 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ACAP3Q96P50 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ACAP3Q96P50 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ACAP3Q96P50 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACAP3Q96P50 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACAP3Q96P50 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ACAP3Q96P50 CROCCP2-202ENST00000412962 2773 ntBASIC18.59■□□□□ 0.57
ACAP3Q96P50 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.58■□□□□ 0.57
ACAP3Q96P50 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ACAP3Q96P50 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ACAP3Q96P50 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ACAP3Q96P50 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ACAP3Q96P50 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
ACAP3Q96P50 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ACAP3Q96P50 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ACAP3Q96P50 SLC25A1P3-201ENST00000395415 828 ntBASIC18.58■□□□□ 0.56
ACAP3Q96P50 IGLL3P-201ENST00000412472 434 ntBASIC18.58■□□□□ 0.56
ACAP3Q96P50 AC087163.2-201ENST00000457299 853 ntBASIC18.58■□□□□ 0.56
ACAP3Q96P50 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.58■□□□□ 0.56
ACAP3Q96P50 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
ACAP3Q96P50 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.58■□□□□ 0.56
ACAP3Q96P50 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.58■□□□□ 0.56
ACAP3Q96P50 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ACAP3Q96P50 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ACAP3Q96P50 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACAP3Q96P50 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACAP3Q96P50 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ACAP3Q96P50 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ACAP3Q96P50 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACAP3Q96P50 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACAP3Q96P50 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACAP3Q96P50 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACAP3Q96P50 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACAP3Q96P50 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACAP3Q96P50 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACAP3Q96P50 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 AC023274.1-201ENST00000418278 595 ntBASIC18.57■□□□□ 0.56
ACAP3Q96P50 BX842568.4-201ENST00000421222 227 ntBASIC18.57■□□□□ 0.56
ACAP3Q96P50 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 AC092865.5-201ENST00000545435 363 ntBASIC18.57■□□□□ 0.56
ACAP3Q96P50 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 AC018845.2-201ENST00000568326 409 ntBASIC18.57■□□□□ 0.56
ACAP3Q96P50 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACAP3Q96P50 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACAP3Q96P50 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACAP3Q96P50 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ACAP3Q96P50 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ACAP3Q96P50 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ACAP3Q96P50 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACAP3Q96P50 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACAP3Q96P50 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACAP3Q96P50 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.56■□□□□ 0.56
ACAP3Q96P50 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACAP3Q96P50 SLC25A6P2-201ENST00000497974 877 ntBASIC18.56■□□□□ 0.56
ACAP3Q96P50 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 AC096734.2-201ENST00000562054 433 ntBASIC18.56■□□□□ 0.56
ACAP3Q96P50 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACAP3Q96P50 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACAP3Q96P50 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACAP3Q96P50 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACAP3Q96P50 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.56■□□□□ 0.56
ACAP3Q96P50 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACAP3Q96P50 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ACAP3Q96P50 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ACAP3Q96P50 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms