Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.36■□□□□ 0.37
CDKL2Q92772 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.36■□□□□ 0.37
CDKL2Q92772 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.36■□□□□ 0.37
CDKL2Q92772 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDKL2Q92772 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDKL2Q92772 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDKL2Q92772 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKL2Q92772 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDKL2Q92772 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKL2Q92772 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDKL2Q92772 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKL2Q92772 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CDKL2Q92772 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKL2Q92772 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKL2Q92772 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKL2Q92772 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKL2Q92772 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDKL2Q92772 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.36■□□□□ 0.37
CDKL2Q92772 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDKL2Q92772 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDKL2Q92772 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.35■□□□□ 0.37
CDKL2Q92772 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDKL2Q92772 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDKL2Q92772 PCDHB19P-201ENST00000570871 2371 ntBASIC17.35■□□□□ 0.37
CDKL2Q92772 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.35■□□□□ 0.37
CDKL2Q92772 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.35■□□□□ 0.37
CDKL2Q92772 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.35■□□□□ 0.37
CDKL2Q92772 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.35■□□□□ 0.37
CDKL2Q92772 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.35■□□□□ 0.37
CDKL2Q92772 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.35■□□□□ 0.37
CDKL2Q92772 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.35■□□□□ 0.37
CDKL2Q92772 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.35■□□□□ 0.37
CDKL2Q92772 AL135999.2-201ENST00000622438 1686 ntBASIC17.35■□□□□ 0.37
CDKL2Q92772 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDKL2Q92772 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDKL2Q92772 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDKL2Q92772 AL603756.1-201ENST00000606511 2163 ntBASIC17.35■□□□□ 0.37
CDKL2Q92772 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDKL2Q92772 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CDKL2Q92772 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.34■□□□□ 0.37
CDKL2Q92772 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CDKL2Q92772 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDKL2Q92772 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDKL2Q92772 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.34■□□□□ 0.37
CDKL2Q92772 AL845331.1-201ENST00000424978 1190 ntBASIC17.34■□□□□ 0.37
CDKL2Q92772 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.34■□□□□ 0.37
CDKL2Q92772 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.34■□□□□ 0.37
CDKL2Q92772 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.34■□□□□ 0.37
CDKL2Q92772 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDKL2Q92772 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.34■□□□□ 0.37
CDKL2Q92772 AL136038.3-201ENST00000561909 1096 ntBASIC17.34■□□□□ 0.37
CDKL2Q92772 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.34■□□□□ 0.37
CDKL2Q92772 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDKL2Q92772 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKL2Q92772 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.34■□□□□ 0.37
CDKL2Q92772 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKL2Q92772 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDKL2Q92772 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.33■□□□□ 0.37
CDKL2Q92772 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.33■□□□□ 0.37
CDKL2Q92772 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKL2Q92772 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.33■□□□□ 0.37
CDKL2Q92772 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
CDKL2Q92772 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.33■□□□□ 0.37
CDKL2Q92772 AC078925.2-201ENST00000624013 1973 ntBASIC17.33■□□□□ 0.37
CDKL2Q92772 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.33■□□□□ 0.37
CDKL2Q92772 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.33■□□□□ 0.37
CDKL2Q92772 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.37
CDKL2Q92772 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.33■□□□□ 0.37
CDKL2Q92772 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.33■□□□□ 0.37
CDKL2Q92772 GPR89P-201ENST00000407924 1495 ntBASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms