Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB40AQ8WXH6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 AC011270.2-201ENST00000624293 2550 ntBASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 CHCHD2P8-201ENST00000429873 447 ntBASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 AC092329.2-201ENST00000598402 547 ntBASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 Z83836.1-201ENST00000624605 1642 ntBASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 KRT89P-201ENST00000620027 1478 ntBASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.12■□□□□ 0.01
RAB40AQ8WXH6 KRT8P47-201ENST00000604727 1398 ntBASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 PCDHB17P-201ENST00000539533 2393 ntBASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 NFIC-211ENST00000641145 8399 ntBASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 KRT18P65-201ENST00000439811 1286 ntBASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 GPR32P1-201ENST00000601788 811 ntBASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 NPAP1P7-201ENST00000613027 823 ntBASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAB40AQ8WXH6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms