Protein–RNA interactions for Protein: Q8NBT2

SPC24, Kinetochore protein Spc24, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24Q8NBT2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 ABHD17AP1-201ENST00000358206 933 ntBASIC19.13■□□□□ 0.65
SPC24Q8NBT2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 AL390955.1-201ENST00000428694 934 ntBASIC19.13■□□□□ 0.65
SPC24Q8NBT2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 HLA-A-202ENST00000376806 1854 ntBASIC19.13■□□□□ 0.65
SPC24Q8NBT2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 AL365203.3-201ENST00000609742 2057 ntBASIC19.13■□□□□ 0.65
SPC24Q8NBT2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SPC24Q8NBT2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 AC124947.2-201ENST00000547118 1133 ntBASIC19.12■□□□□ 0.65
SPC24Q8NBT2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SPC24Q8NBT2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.11■□□□□ 0.65
SPC24Q8NBT2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 MIR4651-201ENST00000582622 73 ntBASIC19.11■□□□□ 0.65
SPC24Q8NBT2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 AC026471.5-201ENST00000615068 467 ntBASIC19.11■□□□□ 0.65
SPC24Q8NBT2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SPC24Q8NBT2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms