Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SYNPOQ8N3V7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SYNPOQ8N3V7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 AC099522.2-201ENST00000607001 744 ntBASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 AKAP8P1-201ENST00000434743 1349 ntBASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SYNPOQ8N3V7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 SLC25A6P5-201ENST00000435663 894 ntBASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 AL592309.1-201ENST00000443127 649 ntBASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNPOQ8N3V7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 AC138028.4-201ENST00000564984 1845 ntBASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 AL161645.1-201ENST00000622716 1255 ntBASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 Z92544.3-201ENST00000624747 417 ntBASIC17.37■□□□□ 0.37
SYNPOQ8N3V7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms