Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 KRT18P48-201ENST00000434763 852 ntBASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 IGHV3-52-201ENST00000519770 353 ntBASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 FAM87A-204ENST00000613235 858 ntBASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRIM42Q8IWZ5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 TERF1P1-201ENST00000311003 1181 ntBASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 TMPOP1-202ENST00000424642 1267 ntBASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 ATP5G1P1-201ENST00000448724 379 ntBASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 RN7SL850P-201ENST00000579959 291 ntBASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM42Q8IWZ5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 COX5BP2-201ENST00000392354 334 ntBASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 HMGA1P5-201ENST00000412453 271 ntBASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 AC010203.1-204ENST00000548782 407 ntBASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM42Q8IWZ5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms