Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.1■□□□□ 0.01
LYSMD2Q8IV50 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 CA15P1-201ENST00000481698 905 ntBASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 CICP4-201ENST00000447359 2812 ntBASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD2Q8IV50 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.08■□□□□ 0.01
LYSMD2Q8IV50 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD2Q8IV50 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
LYSMD2Q8IV50 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD2Q8IV50 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD2Q8IV50 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
LYSMD2Q8IV50 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD2Q8IV50 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD2Q8IV50 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD2Q8IV50 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD2Q8IV50 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LYSMD2Q8IV50 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.08■□□□□ 0
LYSMD2Q8IV50 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.08■□□□□ 0
LYSMD2Q8IV50 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD2Q8IV50 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD2Q8IV50 MFAP1P1-201ENST00000442257 1255 ntBASIC15.08■□□□□ 0
LYSMD2Q8IV50 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
LYSMD2Q8IV50 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.08■□□□□ 0
LYSMD2Q8IV50 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD2Q8IV50 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD2Q8IV50 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.08■□□□□ 0
LYSMD2Q8IV50 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD2Q8IV50 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.08■□□□□ 0
LYSMD2Q8IV50 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.08■□□□□ 0
LYSMD2Q8IV50 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms