Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
LDB1Q86U70 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.14■□□□□ 0.33
LDB1Q86U70 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.14■□□□□ 0.33
LDB1Q86U70 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.14■□□□□ 0.33
LDB1Q86U70 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
LDB1Q86U70 LINC00982-205ENST00000420957 435 ntBASIC17.14■□□□□ 0.33
LDB1Q86U70 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.14■□□□□ 0.33
LDB1Q86U70 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.14■□□□□ 0.33
LDB1Q86U70 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
LDB1Q86U70 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.14■□□□□ 0.33
LDB1Q86U70 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.14■□□□□ 0.33
LDB1Q86U70 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.14■□□□□ 0.33
LDB1Q86U70 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.14■□□□□ 0.33
LDB1Q86U70 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.14■□□□□ 0.33
LDB1Q86U70 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LDB1Q86U70 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LDB1Q86U70 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LDB1Q86U70 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.13■□□□□ 0.33
LDB1Q86U70 FRMD8P1-201ENST00000440433 1524 ntBASIC17.13■□□□□ 0.33
LDB1Q86U70 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LDB1Q86U70 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LDB1Q86U70 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.13■□□□□ 0.33
LDB1Q86U70 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.13■□□□□ 0.33
LDB1Q86U70 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 UNC93B7-201ENST00000509439 705 ntBASIC17.13■□□□□ 0.33
LDB1Q86U70 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.13■□□□□ 0.33
LDB1Q86U70 SART3-203ENST00000546611 1184 ntBASIC17.13■□□□□ 0.33
LDB1Q86U70 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.13■□□□□ 0.33
LDB1Q86U70 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.13■□□□□ 0.33
LDB1Q86U70 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.13■□□□□ 0.33
LDB1Q86U70 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.13■□□□□ 0.33
LDB1Q86U70 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LDB1Q86U70 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
LDB1Q86U70 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LDB1Q86U70 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.12■□□□□ 0.33
LDB1Q86U70 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LDB1Q86U70 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.12■□□□□ 0.33
LDB1Q86U70 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.12■□□□□ 0.33
LDB1Q86U70 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LDB1Q86U70 AL356309.3-201ENST00000624132 1934 ntBASIC17.12■□□□□ 0.33
LDB1Q86U70 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.12■□□□□ 0.33
LDB1Q86U70 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LDB1Q86U70 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.12■□□□□ 0.33
LDB1Q86U70 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.12■□□□□ 0.33
LDB1Q86U70 FGFR3P6-201ENST00000457012 610 ntBASIC17.12■□□□□ 0.33
LDB1Q86U70 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LDB1Q86U70 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.12■□□□□ 0.33
LDB1Q86U70 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.12■□□□□ 0.33
LDB1Q86U70 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.12■□□□□ 0.33
LDB1Q86U70 AC008608.2-201ENST00000606089 416 ntBASIC17.12■□□□□ 0.33
LDB1Q86U70 IFNL4P1-201ENST00000607083 540 ntBASIC17.12■□□□□ 0.33
LDB1Q86U70 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.12■□□□□ 0.33
LDB1Q86U70 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.12■□□□□ 0.33
LDB1Q86U70 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDB1Q86U70 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.12■□□□□ 0.33
LDB1Q86U70 GPR89P-201ENST00000407924 1495 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms