Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHFQ7M4L6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SHFQ7M4L6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 PCDHB17P-201ENST00000539533 2393 ntBASIC15.56■□□□□ 0.08
SHFQ7M4L6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 AC073508.3-201ENST00000619697 1419 ntBASIC15.56■□□□□ 0.08
SHFQ7M4L6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 AC010460.3-201ENST00000511359 1579 ntBASIC15.56■□□□□ 0.08
SHFQ7M4L6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.56■□□□□ 0.08
SHFQ7M4L6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SHFQ7M4L6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 AC005332.3-201ENST00000589904 676 ntBASIC15.55■□□□□ 0.08
SHFQ7M4L6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 AC092364.2-201ENST00000596710 2692 ntBASIC15.55■□□□□ 0.08
SHFQ7M4L6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SHFQ7M4L6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.55■□□□□ 0.08
SHFQ7M4L6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHFQ7M4L6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms