Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.062e-7■□□□□ 8.8
LARP4Q71RC2 CTDNEP1-206ENST00000571409 741 ntTSL 527.67■■■□□ 2.022e-7■□□□□ 8.8
LARP4Q71RC2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.82e-7■□□□□ 8.8
LARP4Q71RC2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.242e-7■□□□□ 8.8
LARP4Q71RC2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.25■□□□□ 0.192e-7■□□□□ 8.8
LARP4Q71RC2 CTDNEP1-211ENST00000575783 876 ntTSL 514.55□□□□□ -0.082e-7■□□□□ 8.8
LARP4Q71RC2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.098e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.47□□□□□ -0.098e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-206ENST00000530019 550 ntTSL 414.47□□□□□ -0.098e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-210ENST00000534180 983 ntTSL 212.36□□□□□ -0.438e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-208ENST00000532829 912 ntTSL 212.29□□□□□ -0.448e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-205ENST00000529631 507 ntTSL 4 BASIC11.55□□□□□ -0.568e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-203ENST00000529191 530 ntTSL 2 BASIC10.3□□□□□ -0.768e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.06□□□□□ -1.128e-15■□□□□ 8.8
LARP4Q71RC2 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.218e-15■□□□□ 8.8
LARP4Q71RC2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.671e-8■□□□□ 8.8
LARP4Q71RC2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.411e-8■□□□□ 8.8
LARP4Q71RC2 RAD23A-208ENST00000591499 1350 ntTSL 217.58■□□□□ 0.41e-8■□□□□ 8.8
LARP4Q71RC2 RAD23A-210ENST00000593114 1691 ntTSL 515.88■□□□□ 0.131e-8■□□□□ 8.8
LARP4Q71RC2 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.02□□□□□ -0.161e-8■□□□□ 8.8
LARP4Q71RC2 RAD23A-202ENST00000586375 894 ntTSL 314□□□□□ -0.171e-8■□□□□ 8.8
LARP4Q71RC2 RAD23A-206ENST00000590881 999 ntTSL 512.8□□□□□ -0.361e-8■□□□□ 8.8
LARP4Q71RC2 TKFC-210ENST00000529479 1781 ntTSL 1 (best)19.79■□□□□ 0.769e-8■□□□□ 8.8
LARP4Q71RC2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.118e-8■□□□□ 8.8
LARP4Q71RC2 SLC7A5-202ENST00000563489 780 ntTSL 214.11□□□□□ -0.155e-24■□□□□ 8.8
LARP4Q71RC2 COL18A1-207ENST00000473212 2515 ntTSL 221.16■□□□□ 0.982e-8■□□□□ 8.8
LARP4Q71RC2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.342e-8■□□□□ 8.8
LARP4Q71RC2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.022e-8■□□□□ 8.8
LARP4Q71RC2 COL18A1-201ENST00000342220 3386 ntTSL 212.71□□□□□ -0.382e-8■□□□□ 8.8
LARP4Q71RC2 PSMB4-205ENST00000493673 1650 ntTSL 514.6□□□□□ -0.072e-8■□□□□ 8.8
LARP4Q71RC2 PSMB4-204ENST00000476467 2067 ntTSL 212.63□□□□□ -0.392e-8■□□□□ 8.8
LARP4Q71RC2 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.412e-8■□□□□ 8.8
LARP4Q71RC2 PSMB4-203ENST00000474100 755 ntTSL 56.78□□□□□ -1.322e-8■□□□□ 8.8
LARP4Q71RC2 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC11.38□□□□□ -0.592e-28■□□□□ 8.8
LARP4Q71RC2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.227e-12■□□□□ 8.8
LARP4Q71RC2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.227e-12■□□□□ 8.8
LARP4Q71RC2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.02■■□□□ 1.282e-12■□□□□ 8.8
LARP4Q71RC2 SELENOP-211ENST00000513303 714 ntTSL 211.78□□□□□ -0.526e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-208ENST00000510965 787 ntTSL 511.29□□□□□ -0.66e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-201ENST00000505309 573 ntTSL 210.15□□□□□ -0.786e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-215ENST00000515626 566 ntTSL 49.34□□□□□ -0.916e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-206ENST00000509276 738 ntTSL 58.76□□□□□ -1.016e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.056e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-202ENST00000506078 799 ntTSL 28.01□□□□□ -1.136e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.136e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC7.27□□□□□ -1.256e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-205ENST00000508937 606 ntTSL 27.27□□□□□ -1.256e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-212ENST00000514218 1047 ntTSL 56.52□□□□□ -1.376e-23■□□□□ 8.8
LARP4Q71RC2 SELENOP-207ENST00000510650 580 ntTSL 34.78□□□□□ -1.646e-23■□□□□ 8.8
LARP4Q71RC2 PPP1CA-207ENST00000532279 552 ntTSL 320.91■□□□□ 0.944e-7■□□□□ 8.8
LARP4Q71RC2 DPH1-207ENST00000571710 2013 ntTSL 1 (best)19.86■□□□□ 0.774e-7■□□□□ 8.8
LARP4Q71RC2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.754e-7■□□□□ 8.8
LARP4Q71RC2 DPH1-205ENST00000570867 2265 ntTSL 219.15■□□□□ 0.664e-7■□□□□ 8.8
LARP4Q71RC2 SDC1-205ENST00000447124 591 ntTSL 418.88■□□□□ 0.614e-7■□□□□ 8.8
LARP4Q71RC2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.68■□□□□ 0.582e-8■□□□□ 8.8
LARP4Q71RC2 DPH1-210ENST00000572684 2607 ntTSL 216.82■□□□□ 0.284e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.174e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-210ENST00000561273 2027 ntTSL 515.92■□□□□ 0.144e-7■□□□□ 8.8
LARP4Q71RC2 ARF5-206ENST00000489673 566 ntTSL 215.84■□□□□ 0.134e-7■□□□□ 8.8
LARP4Q71RC2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.14e-7■□□□□ 8.8
LARP4Q71RC2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.66■□□□□ 0.14e-7■□□□□ 8.8
LARP4Q71RC2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.064e-7■□□□□ 8.8
LARP4Q71RC2 UGGT1-202ENST00000376723 6682 ntTSL 1 (best)14.85□□□□□ -0.034e-7■□□□□ 8.8
LARP4Q71RC2 DPH1-217ENST00000607788 775 ntTSL 514.37□□□□□ -0.114e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-201ENST00000334841 724 ntTSL 314.35□□□□□ -0.114e-7■□□□□ 8.8
LARP4Q71RC2 M6PR-206ENST00000541507 2198 ntTSL 513.93□□□□□ -0.184e-7■□□□□ 8.8
LARP4Q71RC2 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.214e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-204ENST00000558340 1623 ntTSL 513.44□□□□□ -0.264e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.13□□□□□ -0.314e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-206ENST00000559088 719 ntTSL 313.02□□□□□ -0.334e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-211ENST00000561281 1181 ntTSL 1 (best)12.84□□□□□ -0.354e-7■□□□□ 8.8
LARP4Q71RC2 XPO1-206ENST00000428210 6776 ntTSL 212.71□□□□□ -0.374e-7■□□□□ 8.8
LARP4Q71RC2 M6PR-204ENST00000539143 650 ntTSL 512.64□□□□□ -0.394e-7■□□□□ 8.8
LARP4Q71RC2 UBXN4-201ENST00000272638 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.441e-9■□□□□ 8.8
LARP4Q71RC2 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.464e-7■□□□□ 8.8
LARP4Q71RC2 M6PR-201ENST00000000412 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.484e-7■□□□□ 8.8
LARP4Q71RC2 CTNNB1-212ENST00000471014 607 ntTSL 311.64□□□□□ -0.554e-7■□□□□ 8.8
LARP4Q71RC2 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.574e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-209ENST00000561137 2660 ntTSL 211.41□□□□□ -0.584e-7■□□□□ 8.8
LARP4Q71RC2 M6PR-209ENST00000543704 616 ntTSL 311.37□□□□□ -0.594e-7■□□□□ 8.8
LARP4Q71RC2 ARF5-202ENST00000415666 546 ntTSL 511.32□□□□□ -0.64e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-205ENST00000559084 528 nt11.14□□□□□ -0.634e-7■□□□□ 8.8
LARP4Q71RC2 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.654e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-205ENST00000466830 6033 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.674e-7■□□□□ 8.8
LARP4Q71RC2 HNRNPA2B1-207ENST00000495810 482 ntTSL 29.63□□□□□ -0.874e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-209ENST00000477739 3749 ntTSL 1 (best)9.62□□□□□ -0.874e-7■□□□□ 8.8
LARP4Q71RC2 NASP-209ENST00000472408 541 ntTSL 29.42□□□□□ -0.94e-7■□□□□ 8.8
LARP4Q71RC2 M6PR-212ENST00000544193 255 ntTSL 39.22□□□□□ -0.934e-7■□□□□ 8.8
LARP4Q71RC2 UGGT1-203ENST00000418197 599 ntTSL 58.85□□□□□ -0.994e-7■□□□□ 8.8
LARP4Q71RC2 SELENOF-205ENST00000469566 831 ntTSL 28.71□□□□□ -1.022e-8■□□□□ 8.8
LARP4Q71RC2 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.054e-7■□□□□ 8.8
LARP4Q71RC2 COPS6-204ENST00000426712 716 ntTSL 37.98□□□□□ -1.134e-7■□□□□ 8.8
LARP4Q71RC2 UGGT1-206ENST00000465836 517 ntTSL 27.06□□□□□ -1.284e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-208ENST00000469102 788 ntTSL 1 (best)6.71□□□□□ -1.344e-7■□□□□ 8.8
LARP4Q71RC2 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.69□□□□□ -1.344e-7■□□□□ 8.8
LARP4Q71RC2 PRCP-205ENST00000526918 537 ntTSL 46.15□□□□□ -1.424e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-210ENST00000482499 446 ntTSL 26.05□□□□□ -1.444e-7■□□□□ 8.8
LARP4Q71RC2 XPO1-209ENST00000443240 565 ntTSL 45.95□□□□□ -1.464e-7■□□□□ 8.8
LARP4Q71RC2 CMC1-202ENST00000396610 593 ntTSL 25.79□□□□□ -1.484e-7■□□□□ 8.8
LARP4Q71RC2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.494e-7■□□□□ 8.8
Retrieved 100 of 15,922 protein–RNA pairs in 629.7 ms