RNA–Protein interactions for RNA: ENST00000482499.1

CMC1-210, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 446 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-210ENST00000482499 AEBP2Q6ZN18 517 aaPredicted RBP29.37■■■□□ 2.29
CMC1-210ENST00000482499 CHIC1Q5VXU3 224 aa27.83■■■□□ 2.05
CMC1-210ENST00000482499 SENP3Q9H4L4 574 aaPredicted RBP24.97■■□□□ 1.59
CMC1-210ENST00000482499 PHF23Q9BUL5 403 aaPredicted RBP24.7■■□□□ 1.54
CMC1-210ENST00000482499 FOXD1Q16676 465 aa23.34■■□□□ 1.33
CMC1-210ENST00000482499 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
CMC1-210ENST00000482499 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
CMC1-210ENST00000482499 ADRA2BP18089 450 aa21.78■■□□□ 1.08
CMC1-210ENST00000482499 PIAS4Q8N2W9 510 aaPredicted RBP21.78■■□□□ 1.08
CMC1-210ENST00000482499 MSH5O43196 834 aa21.76■■□□□ 1.07
CMC1-210ENST00000482499 POTEDQ86YR6 584 aa21.33■■□□□ 1.01
CMC1-210ENST00000482499 MAPK8IP2Q13387 824 aaPredicted RBP20.03■□□□□ 0.8
CMC1-210ENST00000482499 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
CMC1-210ENST00000482499 DMRT2Q9Y5R5 561 aa19.81■□□□□ 0.76
CMC1-210ENST00000482499 PPP4R3CPQ6ZMV5 832 aa19.5■□□□□ 0.71
CMC1-210ENST00000482499 CNKSR2Q8WXI2 1034 aa19.1■□□□□ 0.65
CMC1-210ENST00000482499 HOXD11P31277 338 aaPredicted RBP19.08■□□□□ 0.64
CMC1-210ENST00000482499 DCAF8L1A6NGE4 600 aa19.04■□□□□ 0.64
CMC1-210ENST00000482499 RNF216Q9NWF9 866 aaPredicted RBP18.93■□□□□ 0.62
CMC1-210ENST00000482499 CACNB1Q02641 598 aaPredicted RBP18.72■□□□□ 0.59
CMC1-210ENST00000482499 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
CMC1-210ENST00000482499 RNF39Q9H2S5 420 aa18.61■□□□□ 0.57
CMC1-210ENST00000482499 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
CMC1-210ENST00000482499 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
CMC1-210ENST00000482499 C1QBPQ07021 282 aaKnown RBP18.31■□□□□ 0.52
CMC1-210ENST00000482499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.51e-6■■■□□ 18.6
CMC1-210ENST00000482499 KCNA4P22459 653 aa18.15■□□□□ 0.5
CMC1-210ENST00000482499 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.44
CMC1-210ENST00000482499 SLC4A2P04920 1241 aa17.68■□□□□ 0.42
CMC1-210ENST00000482499 SPINK5Q9NQ38 1064 aaPredicted RBP17.61■□□□□ 0.41
CMC1-210ENST00000482499 CAPN15O75808 1086 aa17.54■□□□□ 0.4
CMC1-210ENST00000482499 DSG3P32926 999 aa17.44■□□□□ 0.38
CMC1-210ENST00000482499 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.36
CMC1-210ENST00000482499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
CMC1-210ENST00000482499 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
CMC1-210ENST00000482499 APLP2Q06481 763 aa17.22■□□□□ 0.35
CMC1-210ENST00000482499 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
CMC1-210ENST00000482499 ABCB7O75027 752 aa17.16■□□□□ 0.34
CMC1-210ENST00000482499 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
CMC1-210ENST00000482499 SLC4A1APQ9BWU0 796 aaKnown RBP17.09■□□□□ 0.33
CMC1-210ENST00000482499 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
CMC1-210ENST00000482499 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
CMC1-210ENST00000482499 POLA2Q14181 598 aa16.8■□□□□ 0.28
CMC1-210ENST00000482499 ATF5Q9Y2D1 282 aaPredicted RBP16.75■□□□□ 0.27
CMC1-210ENST00000482499 ZBTB22O15209 634 aa16.71■□□□□ 0.27
CMC1-210ENST00000482499 POTEHQ6S545 545 aa16.7■□□□□ 0.26
CMC1-210ENST00000482499 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
CMC1-210ENST00000482499 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
CMC1-210ENST00000482499 ATXN8OSP0DMR3 200 aa16.33■□□□□ 0.2
CMC1-210ENST00000482499 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
CMC1-210ENST00000482499 CHRDL2Q6WN34 429 aa16.26■□□□□ 0.19
CMC1-210ENST00000482499 AKT1S1Q96B36 256 aa16.22■□□□□ 0.19
CMC1-210ENST00000482499 REM2Q8IYK8 340 aaPredicted RBP16.1■□□□□ 0.17
CMC1-210ENST00000482499 FBLN2P98095 1184 aa16■□□□□ 0.15
CMC1-210ENST00000482499 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
CMC1-210ENST00000482499 PITPNM1O00562 1244 aa15.94■□□□□ 0.14
CMC1-210ENST00000482499 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
CMC1-210ENST00000482499 SPDYE2BA6NHP3 402 aa15.9■□□□□ 0.14
CMC1-210ENST00000482499 SPDYE6P0CI01 402 aa15.9■□□□□ 0.14
CMC1-210ENST00000482499 SPDYE2Q495Y8 402 aa15.9■□□□□ 0.14
CMC1-210ENST00000482499 PIP4P2Q8N4L2 257 aa15.9■□□□□ 0.14
CMC1-210ENST00000482499 FXR2P51116 673 aaKnown RBP eCLIP15.78■□□□□ 0.12
CMC1-210ENST00000482499 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
CMC1-210ENST00000482499 EHMT2Q96KQ7 1210 aa15.72■□□□□ 0.11
CMC1-210ENST00000482499 SSUH2Q9Y2M2 353 aa15.71■□□□□ 0.11
CMC1-210ENST00000482499 CLEC11AQ9Y240 323 aa15.66■□□□□ 0.1
CMC1-210ENST00000482499 SP7Q8TDD2 431 aaPredicted RBP15.63■□□□□ 0.09
CMC1-210ENST00000482499 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
CMC1-210ENST00000482499 HAX1O00165 279 aa15.6■□□□□ 0.09
CMC1-210ENST00000482499 PRKAR2AP13861 404 aaKnown RBP15.52■□□□□ 0.08
CMC1-210ENST00000482499 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.08
CMC1-210ENST00000482499 EVX2Q03828 476 aa15.47■□□□□ 0.07
CMC1-210ENST00000482499 CHADLQ6NUI6 762 aa15.39■□□□□ 0.05
CMC1-210ENST00000482499 PRR29P0C7W0 189 aa15.37■□□□□ 0.05
CMC1-210ENST00000482499 C19orf67A6NJJ6 358 aa15.28■□□□□ 0.04
CMC1-210ENST00000482499 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
CMC1-210ENST00000482499 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
CMC1-210ENST00000482499 GABBR2O75899 941 aa15.07■□□□□ 0
CMC1-210ENST00000482499 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
CMC1-210ENST00000482499 CD44P16070 742 aaKnown RBP15.02■□□□□ -0
CMC1-210ENST00000482499 CREBZFQ9NS37 354 aa15.01□□□□□ -0.01
CMC1-210ENST00000482499 ZRANB1Q9UGI0 708 aa14.81□□□□□ -0.04
CMC1-210ENST00000482499 POTEIP0CG38 1075 aa14.79□□□□□ -0.04
CMC1-210ENST00000482499 PROM2Q8N271 834 aa14.79□□□□□ -0.04
CMC1-210ENST00000482499 ZNF579Q8NAF0 562 aaKnown RBP14.77□□□□□ -0.05
CMC1-210ENST00000482499 MNX1P50219 401 aaPredicted RBP14.76□□□□□ -0.05
CMC1-210ENST00000482499 CLCN6P51797 869 aa14.72□□□□□ -0.05
CMC1-210ENST00000482499 LHX8Q68G74 356 aa14.68□□□□□ -0.06
CMC1-210ENST00000482499 NPM1P06748 294 aaKnown RBP eCLIP14.67□□□□□ -0.06
CMC1-210ENST00000482499 GALR2O43603 387 aaPredicted RBP14.64□□□□□ -0.07
CMC1-210ENST00000482499 PAK3O75914 559 aaPredicted RBP14.63□□□□□ -0.07
CMC1-210ENST00000482499 DCBLD2Q96PD2 775 aa14.63□□□□□ -0.07
CMC1-210ENST00000482499 PHF12Q96QT6 1004 aa14.63□□□□□ -0.07
CMC1-210ENST00000482499 MIER1Q8N108 512 aa14.48□□□□□ -0.09
CMC1-210ENST00000482499 TSPYL2Q9H2G4 693 aaPredicted RBP14.48□□□□□ -0.09
CMC1-210ENST00000482499 FKBP8Q14318 412 aa14.43□□□□□ -0.1
CMC1-210ENST00000482499 MS4A3Q96HJ5 214 aa14.42□□□□□ -0.1
CMC1-210ENST00000482499 CCDC61Q9Y6R9 512 aa14.4□□□□□ -0.1
CMC1-210ENST00000482499 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
CMC1-210ENST00000482499 PELP1Q8IZL8 1130 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms