RNA–Protein interactions for RNA: ENST00000469102.1

CMC1-208, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 788 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-208ENST00000469102 AEBP2Q6ZN18 517 aaPredicted RBP27.86■■■□□ 2.05
CMC1-208ENST00000469102 CHIC1Q5VXU3 224 aa26.96■■□□□ 1.91
CMC1-208ENST00000469102 PHF23Q9BUL5 403 aaPredicted RBP23.75■■□□□ 1.39
CMC1-208ENST00000469102 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
CMC1-208ENST00000469102 FOXD1Q16676 465 aa21.97■■□□□ 1.11
CMC1-208ENST00000469102 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
CMC1-208ENST00000469102 PPP6R1Q9UPN7 881 aa21.03■□□□□ 0.96
CMC1-208ENST00000469102 ADRA2BP18089 450 aa20.97■□□□□ 0.95
CMC1-208ENST00000469102 PIAS4Q8N2W9 510 aaPredicted RBP20.61■□□□□ 0.89
CMC1-208ENST00000469102 MSH5O43196 834 aa20.24■□□□□ 0.83
CMC1-208ENST00000469102 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
CMC1-208ENST00000469102 MAPK8IP2Q13387 824 aaPredicted RBP19.1■□□□□ 0.65
CMC1-208ENST00000469102 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
CMC1-208ENST00000469102 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
CMC1-208ENST00000469102 DMRT2Q9Y5R5 561 aa18.82■□□□□ 0.6
CMC1-208ENST00000469102 CNKSR2Q8WXI2 1034 aa18.66■□□□□ 0.58
CMC1-208ENST00000469102 KCNA4P22459 653 aa18.55■□□□□ 0.56
CMC1-208ENST00000469102 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
CMC1-208ENST00000469102 NPM3O75607 178 aaKnown RBP18.37■□□□□ 0.53
CMC1-208ENST00000469102 HOXD11P31277 338 aaPredicted RBP18.36■□□□□ 0.53
CMC1-208ENST00000469102 RNF216Q9NWF9 866 aaPredicted RBP18.35■□□□□ 0.53
CMC1-208ENST00000469102 DCAF8L1A6NGE4 600 aa17.95■□□□□ 0.46
CMC1-208ENST00000469102 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
CMC1-208ENST00000469102 SLC4A1APQ9BWU0 796 aaKnown RBP17.58■□□□□ 0.4
CMC1-208ENST00000469102 SLC4A2P04920 1241 aa17.43■□□□□ 0.38
CMC1-208ENST00000469102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.381e-6■■■□□ 18.6
CMC1-208ENST00000469102 RNF39Q9H2S5 420 aa17.39■□□□□ 0.37
CMC1-208ENST00000469102 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
CMC1-208ENST00000469102 C1QBPQ07021 282 aaKnown RBP17.13■□□□□ 0.33
CMC1-208ENST00000469102 ZBTB22O15209 634 aa17.1■□□□□ 0.33
CMC1-208ENST00000469102 FOXD4L1Q9NU39 408 aa17.07■□□□□ 0.32
CMC1-208ENST00000469102 CACNB1Q02641 598 aaPredicted RBP17.03■□□□□ 0.32
CMC1-208ENST00000469102 MYCNP04198 464 aaPredicted RBP16.92■□□□□ 0.3
CMC1-208ENST00000469102 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
CMC1-208ENST00000469102 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
CMC1-208ENST00000469102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.81■□□□□ 0.28
CMC1-208ENST00000469102 HNRNPUL2Q1KMD3 747 aaKnown RBP16.81■□□□□ 0.28
CMC1-208ENST00000469102 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
CMC1-208ENST00000469102 SAMD1Q6SPF0 538 aaPredicted RBP16.77■□□□□ 0.28
CMC1-208ENST00000469102 CAPN15O75808 1086 aa16.66■□□□□ 0.26
CMC1-208ENST00000469102 APLP2Q06481 763 aa16.64■□□□□ 0.25
CMC1-208ENST00000469102 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
CMC1-208ENST00000469102 TRHP20396 242 aaPredicted RBP16.54■□□□□ 0.24
CMC1-208ENST00000469102 ZNF219Q9P2Y4 722 aaPredicted RBP16.5■□□□□ 0.23
CMC1-208ENST00000469102 ATXN8OSP0DMR3 200 aa16.49■□□□□ 0.23
CMC1-208ENST00000469102 DSG3P32926 999 aa16.48■□□□□ 0.23
CMC1-208ENST00000469102 ABCB7O75027 752 aa16.35■□□□□ 0.21
CMC1-208ENST00000469102 POLA2Q14181 598 aa16.26■□□□□ 0.19
CMC1-208ENST00000469102 ZBTB12Q9Y330 459 aaPredicted RBP15.9■□□□□ 0.14
CMC1-208ENST00000469102 MKRN4PQ13434 485 aaPredicted RBP15.85■□□□□ 0.13
CMC1-208ENST00000469102 FBLN2P98095 1184 aa15.76■□□□□ 0.11
CMC1-208ENST00000469102 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
CMC1-208ENST00000469102 RBM42Q9BTD8 480 aaKnown RBP15.63■□□□□ 0.09
CMC1-208ENST00000469102 SPDYE2BA6NHP3 402 aa15.5■□□□□ 0.07
CMC1-208ENST00000469102 SPDYE6P0CI01 402 aa15.5■□□□□ 0.07
CMC1-208ENST00000469102 SPDYE2Q495Y8 402 aa15.5■□□□□ 0.07
CMC1-208ENST00000469102 AKT1S1Q96B36 256 aa15.43■□□□□ 0.06
CMC1-208ENST00000469102 ZNF692Q9BU19 519 aaPredicted RBP15.41■□□□□ 0.06
CMC1-208ENST00000469102 SSUH2Q9Y2M2 353 aa15.4■□□□□ 0.06
CMC1-208ENST00000469102 SPDYE4A6NLX3 237 aa15.32■□□□□ 0.04
CMC1-208ENST00000469102 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
CMC1-208ENST00000469102 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
CMC1-208ENST00000469102 FKBP8Q14318 412 aa15.16■□□□□ 0.02
CMC1-208ENST00000469102 PITPNM1O00562 1244 aa15.15■□□□□ 0.02
CMC1-208ENST00000469102 CHRDL2Q6WN34 429 aa15.11■□□□□ 0.01
CMC1-208ENST00000469102 PROM2Q8N271 834 aa15.1■□□□□ 0.01
CMC1-208ENST00000469102 SPDYE1Q8NFV5 336 aaPredicted RBP15.07■□□□□ 0
CMC1-208ENST00000469102 CLEC11AQ9Y240 323 aa15.02■□□□□ -0
CMC1-208ENST00000469102 FXR2P51116 673 aaKnown RBP eCLIP14.9□□□□□ -0.02
CMC1-208ENST00000469102 PIP4P2Q8N4L2 257 aa14.9□□□□□ -0.02
CMC1-208ENST00000469102 STAG3Q9UJ98 1225 aa14.87□□□□□ -0.03
CMC1-208ENST00000469102 PRR29P0C7W0 189 aa14.86□□□□□ -0.03
CMC1-208ENST00000469102 POTEHQ6S545 545 aa14.86□□□□□ -0.03
CMC1-208ENST00000469102 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
CMC1-208ENST00000469102 CHADLQ6NUI6 762 aa14.72□□□□□ -0.05
CMC1-208ENST00000469102 CREBZFQ9NS37 354 aa14.69□□□□□ -0.06
CMC1-208ENST00000469102 FBXO3Q9UK99 471 aa14.62□□□□□ -0.07
CMC1-208ENST00000469102 FARP1Q9Y4F1 1045 aaPredicted RBP14.56□□□□□ -0.08
CMC1-208ENST00000469102 MNX1P50219 401 aaPredicted RBP14.54□□□□□ -0.08
CMC1-208ENST00000469102 MIER1Q8N108 512 aa14.53□□□□□ -0.08
CMC1-208ENST00000469102 VASPP50552 380 aaPredicted RBP14.48□□□□□ -0.09
CMC1-208ENST00000469102 PLCD3Q8N3E9 789 aa14.47□□□□□ -0.09
CMC1-208ENST00000469102 HAX1O00165 279 aa14.43□□□□□ -0.1
CMC1-208ENST00000469102 C19orf67A6NJJ6 358 aa14.4□□□□□ -0.1
CMC1-208ENST00000469102 EVX2Q03828 476 aa14.4□□□□□ -0.1
CMC1-208ENST00000469102 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
CMC1-208ENST00000469102 NPM1P06748 294 aaKnown RBP eCLIP14.35□□□□□ -0.11
CMC1-208ENST00000469102 IFNLR1Q8IU57 520 aaPredicted RBP14.31□□□□□ -0.12
CMC1-208ENST00000469102 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
CMC1-208ENST00000469102 ZBTB47Q9UFB7 747 aaPredicted RBP14.28□□□□□ -0.12
CMC1-208ENST00000469102 NUBP1P53384 320 aa14.24□□□□□ -0.13
CMC1-208ENST00000469102 KLHL34Q8N239 644 aa14.23□□□□□ -0.13
CMC1-208ENST00000469102 RASEFQ8IZ41 740 aa14.22□□□□□ -0.13
CMC1-208ENST00000469102 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
CMC1-208ENST00000469102 ZRANB1Q9UGI0 708 aa14.18□□□□□ -0.14
CMC1-208ENST00000469102 TSPYL2Q9H2G4 693 aaPredicted RBP14.15□□□□□ -0.14
CMC1-208ENST00000469102 PAK3O75914 559 aaPredicted RBP14.12□□□□□ -0.15
CMC1-208ENST00000469102 ZNF579Q8NAF0 562 aaKnown RBP14.12□□□□□ -0.15
CMC1-208ENST00000469102 SPOCK2Q92563 424 aa14.11□□□□□ -0.15
CMC1-208ENST00000469102 CCDC61Q9Y6R9 512 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms