Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
HMGA2P52926 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HMGA2P52926 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGA2P52926 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HMGA2P52926 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 AC006538.1-201ENST00000567905 1585 ntBASIC15.66■□□□□ 0.1
HMGA2P52926 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HMGA2P52926 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGA2P52926 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGA2P52926 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.66■□□□□ 0.1
HMGA2P52926 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
HMGA2P52926 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 AC005521.1-201ENST00000393351 872 ntBASIC15.65■□□□□ 0.1
HMGA2P52926 AL645929.1-201ENST00000420084 975 ntBASIC15.65■□□□□ 0.1
HMGA2P52926 ACTG1P4-201ENST00000425123 1122 ntBASIC15.65■□□□□ 0.1
HMGA2P52926 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
HMGA2P52926 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGA2P52926 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGA2P52926 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGA2P52926 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGA2P52926 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGA2P52926 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGA2P52926 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGA2P52926 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
HMGA2P52926 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGA2P52926 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
HMGA2P52926 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 AL365203.3-201ENST00000609742 2057 ntBASIC15.64■□□□□ 0.09
HMGA2P52926 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HMGA2P52926 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
HMGA2P52926 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGA2P52926 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HMGA2P52926 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGA2P52926 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGA2P52926 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
HMGA2P52926 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.64■□□□□ 0.09
HMGA2P52926 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.64■□□□□ 0.09
HMGA2P52926 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.64■□□□□ 0.09
HMGA2P52926 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.64■□□□□ 0.09
HMGA2P52926 AC073592.5-201ENST00000624854 528 ntBASIC15.64■□□□□ 0.09
HMGA2P52926 AC133561.5-201ENST00000635547 218 ntBASIC15.64■□□□□ 0.09
HMGA2P52926 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGA2P52926 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGA2P52926 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HMGA2P52926 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HMGA2P52926 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGA2P52926 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGA2P52926 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
HMGA2P52926 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGA2P52926 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGA2P52926 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms