Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.8■□□□□ 0.44
SCNN1AP37088 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.8■□□□□ 0.44
SCNN1AP37088 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 AC129492.6-201ENST00000611383 1305 ntBASIC17.8■□□□□ 0.44
SCNN1AP37088 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.8■□□□□ 0.44
SCNN1AP37088 MRPL20P1-201ENST00000400819 433 ntBASIC17.8■□□□□ 0.44
SCNN1AP37088 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.8■□□□□ 0.44
SCNN1AP37088 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
SCNN1AP37088 AC108073.2-201ENST00000464002 357 ntBASIC17.8■□□□□ 0.44
SCNN1AP37088 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.8■□□□□ 0.44
SCNN1AP37088 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.8■□□□□ 0.44
SCNN1AP37088 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SCNN1AP37088 AC091167.2-201ENST00000579581 588 ntBASIC17.8■□□□□ 0.44
SCNN1AP37088 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SCNN1AP37088 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.8■□□□□ 0.44
SCNN1AP37088 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.8■□□□□ 0.44
SCNN1AP37088 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SCNN1AP37088 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SCNN1AP37088 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCNN1AP37088 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.8■□□□□ 0.44
SCNN1AP37088 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.8■□□□□ 0.44
SCNN1AP37088 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.79■□□□□ 0.44
SCNN1AP37088 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 AC022211.2-201ENST00000585075 2527 ntBASIC17.79■□□□□ 0.44
SCNN1AP37088 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 AD000864.1-201ENST00000624076 2295 ntBASIC17.79■□□□□ 0.44
SCNN1AP37088 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.79■□□□□ 0.44
SCNN1AP37088 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.79■□□□□ 0.44
SCNN1AP37088 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SCNN1AP37088 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.79■□□□□ 0.44
SCNN1AP37088 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.79■□□□□ 0.44
SCNN1AP37088 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.79■□□□□ 0.44
SCNN1AP37088 AC107918.2-201ENST00000530817 355 ntBASIC17.79■□□□□ 0.44
SCNN1AP37088 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.79■□□□□ 0.44
SCNN1AP37088 AL121894.2-201ENST00000602977 491 ntBASIC17.79■□□□□ 0.44
SCNN1AP37088 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.79■□□□□ 0.44
SCNN1AP37088 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SCNN1AP37088 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.79■□□□□ 0.44
SCNN1AP37088 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.79■□□□□ 0.44
SCNN1AP37088 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SCNN1AP37088 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCNN1AP37088 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.79■□□□□ 0.44
SCNN1AP37088 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SCNN1AP37088 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.78■□□□□ 0.44
SCNN1AP37088 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.78■□□□□ 0.44
SCNN1AP37088 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.78■□□□□ 0.44
SCNN1AP37088 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.78■□□□□ 0.44
SCNN1AP37088 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
SCNN1AP37088 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.78■□□□□ 0.44
SCNN1AP37088 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.78■□□□□ 0.44
SCNN1AP37088 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.78■□□□□ 0.44
SCNN1AP37088 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCNN1AP37088 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
SCNN1AP37088 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.78■□□□□ 0.44
SCNN1AP37088 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.78■□□□□ 0.44
SCNN1AP37088 AC010654.1-201ENST00000615722 808 ntBASIC17.78■□□□□ 0.44
SCNN1AP37088 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SCNN1AP37088 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms