Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 ELL2P1-201ENST00000413990 1906 ntBASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 CXCL1P1-201ENST00000502804 216 ntBASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 SNHG9-202ENST00000564014 471 ntBASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 PKD1P1-201ENST00000458669 6805 ntBASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 ACTG1P14-201ENST00000446382 1122 ntBASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 PAWRP1-201ENST00000451083 565 ntBASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 AC074386.1-202ENST00000463561 864 ntBASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB40ALP0C0E4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 AC025580.3-201ENST00000617932 1424 ntBASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB40ALP0C0E4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms