Protein–RNA interactions for Protein: P08151

GLI1, Zinc finger protein GLI1, humanhuman

Predictions only

Length 1,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GLI1P08151 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.36■□□□□ 0.53
GLI1P08151 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.36■□□□□ 0.53
GLI1P08151 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.36■□□□□ 0.53
GLI1P08151 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.36■□□□□ 0.53
GLI1P08151 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GLI1P08151 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GLI1P08151 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GLI1P08151 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
GLI1P08151 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
GLI1P08151 AC073592.5-201ENST00000624854 528 ntBASIC18.36■□□□□ 0.53
GLI1P08151 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GLI1P08151 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GLI1P08151 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GLI1P08151 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
GLI1P08151 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.35■□□□□ 0.53
GLI1P08151 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 AL603756.1-201ENST00000606511 2163 ntBASIC18.35■□□□□ 0.53
GLI1P08151 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 AC046185.3-201ENST00000623228 1824 ntBASIC18.35■□□□□ 0.53
GLI1P08151 AC132938.5-201ENST00000624980 1813 ntBASIC18.35■□□□□ 0.53
GLI1P08151 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GLI1P08151 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.35■□□□□ 0.53
GLI1P08151 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.35■□□□□ 0.53
GLI1P08151 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
GLI1P08151 REXO1L6P-202ENST00000619970 1078 ntBASIC18.35■□□□□ 0.53
GLI1P08151 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.35■□□□□ 0.53
GLI1P08151 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GLI1P08151 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.34■□□□□ 0.53
GLI1P08151 SIGLEC16-201ENST00000599858 1437 ntBASIC18.34■□□□□ 0.53
GLI1P08151 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.34■□□□□ 0.53
GLI1P08151 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GLI1P08151 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.34■□□□□ 0.53
GLI1P08151 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.34■□□□□ 0.53
GLI1P08151 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
GLI1P08151 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.34■□□□□ 0.53
GLI1P08151 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 AP001269.4-201ENST00000609611 512 ntBASIC18.34■□□□□ 0.53
GLI1P08151 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 AC073592.4-201ENST00000623827 446 ntBASIC18.34■□□□□ 0.53
GLI1P08151 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
GLI1P08151 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.34■□□□□ 0.53
GLI1P08151 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.34■□□□□ 0.53
GLI1P08151 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
GLI1P08151 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GLI1P08151 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GLI1P08151 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GLI1P08151 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GLI1P08151 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GLI1P08151 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms