Protein–RNA interactions for Protein: Q9C035

TRIM5, Tripartite motif-containing protein 5, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5Q9C035 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TRIM5Q9C035 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRIM5Q9C035 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM5Q9C035 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM5Q9C035 EGLN1P1-201ENST00000531623 762 ntBASIC19.22■□□□□ 0.67
TRIM5Q9C035 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM5Q9C035 AL512604.3-201ENST00000569583 964 ntBASIC19.22■□□□□ 0.67
TRIM5Q9C035 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.22■□□□□ 0.67
TRIM5Q9C035 ITM2C-210ENST00000620962 501 ntBASIC19.22■□□□□ 0.67
TRIM5Q9C035 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM5Q9C035 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TRIM5Q9C035 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM5Q9C035 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM5Q9C035 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRIM5Q9C035 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM5Q9C035 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM5Q9C035 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM5Q9C035 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM5Q9C035 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM5Q9C035 FAM201B-201ENST00000458407 597 ntBASIC19.21■□□□□ 0.67
TRIM5Q9C035 AC128688.1-201ENST00000487626 519 ntBASIC19.21■□□□□ 0.67
TRIM5Q9C035 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM5Q9C035 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM5Q9C035 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM5Q9C035 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TRIM5Q9C035 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRIM5Q9C035 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
TRIM5Q9C035 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM5Q9C035 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM5Q9C035 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM5Q9C035 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 AC103702.1-201ENST00000548801 2630 ntBASIC19.2■□□□□ 0.66
TRIM5Q9C035 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM5Q9C035 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM5Q9C035 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM5Q9C035 AC105917.1-201ENST00000506637 2539 ntBASIC19.19■□□□□ 0.66
TRIM5Q9C035 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM5Q9C035 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms