Protein–RNA interactions for Protein: Q8IYA8

CCDC36, Interactor of HORMAD1 protein 1, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36Q8IYA8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CCDC36Q8IYA8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC36Q8IYA8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC36Q8IYA8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CCDC36Q8IYA8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCDC36Q8IYA8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.46■□□□□ 0.06
CCDC36Q8IYA8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC36Q8IYA8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CCDC36Q8IYA8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC36Q8IYA8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CCDC36Q8IYA8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CCDC36Q8IYA8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
CCDC36Q8IYA8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
CCDC36Q8IYA8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 AC010460.3-201ENST00000511359 1579 ntBASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 IGHV3-52-201ENST00000519770 353 ntBASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
CCDC36Q8IYA8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 AC005104.2-201ENST00000427818 678 ntBASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 AL691432.3-201ENST00000621860 400 ntBASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 AC080080.1-201ENST00000625121 2420 ntBASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC36Q8IYA8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC36Q8IYA8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms