Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL23A1Q86Y22 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL23A1Q86Y22 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
COL23A1Q86Y22 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.31■■□□□ 1
COL23A1Q86Y22 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.31■■□□□ 1
COL23A1Q86Y22 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.3■■□□□ 1
COL23A1Q86Y22 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.3■■□□□ 1
COL23A1Q86Y22 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
COL23A1Q86Y22 FOXO1B-201ENST00000504678 1527 ntBASIC21.3■■□□□ 1
COL23A1Q86Y22 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL23A1Q86Y22 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC21.3■■□□□ 1
COL23A1Q86Y22 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.3■■□□□ 1
COL23A1Q86Y22 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL23A1Q86Y22 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COL23A1Q86Y22 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC21.3■■□□□ 1
COL23A1Q86Y22 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.3■■□□□ 1
COL23A1Q86Y22 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.3■■□□□ 1
COL23A1Q86Y22 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL23A1Q86Y22 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL23A1Q86Y22 RAB43P1-201ENST00000561790 589 ntBASIC21.3■■□□□ 1
COL23A1Q86Y22 WASH4P-201ENST00000564273 1246 ntBASIC21.3■■□□□ 1
COL23A1Q86Y22 MIR4259-201ENST00000584466 101 ntBASIC21.3■■□□□ 1
COL23A1Q86Y22 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL23A1Q86Y22 AC073389.1-201ENST00000595595 795 ntBASIC21.3■■□□□ 1
COL23A1Q86Y22 AC004790.1-201ENST00000612686 536 ntBASIC21.3■■□□□ 1
COL23A1Q86Y22 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL23A1Q86Y22 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
COL23A1Q86Y22 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL23A1Q86Y22 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
COL23A1Q86Y22 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL23A1Q86Y22 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.29■■□□□ 1
COL23A1Q86Y22 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.29■■□□□ 1
COL23A1Q86Y22 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.29■■□□□ 1
COL23A1Q86Y22 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL23A1Q86Y22 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
COL23A1Q86Y22 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL23A1Q86Y22 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
COL23A1Q86Y22 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC21.29■■□□□ 1
COL23A1Q86Y22 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL23A1Q86Y22 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC21.29■■□□□ 1
COL23A1Q86Y22 DFFBP1-201ENST00000433250 979 ntBASIC21.29■■□□□ 1
COL23A1Q86Y22 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL23A1Q86Y22 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC21.29■■□□□ 1
COL23A1Q86Y22 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC21.29■■□□□ 1
COL23A1Q86Y22 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.29■■□□□ 1
COL23A1Q86Y22 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.29■■□□□ 1
COL23A1Q86Y22 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
COL23A1Q86Y22 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.29■■□□□ 1
COL23A1Q86Y22 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.29■■□□□ 1
COL23A1Q86Y22 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COL23A1Q86Y22 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL23A1Q86Y22 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.29■■□□□ 1
COL23A1Q86Y22 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.29■■□□□ 1
COL23A1Q86Y22 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL23A1Q86Y22 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL23A1Q86Y22 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL23A1Q86Y22 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
COL23A1Q86Y22 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL23A1Q86Y22 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
COL23A1Q86Y22 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
COL23A1Q86Y22 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.28■■□□□ 1
COL23A1Q86Y22 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.28■■□□□ 1
COL23A1Q86Y22 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL23A1Q86Y22 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC21.28■■□□□ 1
COL23A1Q86Y22 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
COL23A1Q86Y22 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL23A1Q86Y22 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
COL23A1Q86Y22 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
COL23A1Q86Y22 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL23A1Q86Y22 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.28■■□□□ 1
COL23A1Q86Y22 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.28■■□□□ 1
COL23A1Q86Y22 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
COL23A1Q86Y22 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.28■■□□□ 1
COL23A1Q86Y22 AC135586.1-201ENST00000539323 574 ntBASIC21.28■■□□□ 1
COL23A1Q86Y22 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.28■■□□□ 1
COL23A1Q86Y22 AC008494.3-201ENST00000606615 944 ntBASIC21.28■■□□□ 1
COL23A1Q86Y22 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL23A1Q86Y22 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.28■■□□□ 1
COL23A1Q86Y22 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.28■■□□□ 1
COL23A1Q86Y22 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL23A1Q86Y22 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.28■■□□□ 1
COL23A1Q86Y22 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL23A1Q86Y22 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
COL23A1Q86Y22 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
COL23A1Q86Y22 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL23A1Q86Y22 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
COL23A1Q86Y22 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL23A1Q86Y22 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL23A1Q86Y22 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
COL23A1Q86Y22 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.27■■□□□ 1
COL23A1Q86Y22 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.27■■□□□ 1
COL23A1Q86Y22 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.27■■□□□ 1
COL23A1Q86Y22 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL23A1Q86Y22 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL23A1Q86Y22 AL035456.1-201ENST00000456064 1369 ntBASIC21.27■■□□□ 1
COL23A1Q86Y22 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL23A1Q86Y22 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL23A1Q86Y22 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
COL23A1Q86Y22 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL23A1Q86Y22 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms