Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 UXT-AS1-201ENST00000590504 1525 ntBASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 AL512384.1-201ENST00000406683 331 ntBASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 AC138969.3-201ENST00000546612 1459 ntBASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 AC138932.2-201ENST00000548268 1459 ntBASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 AC126755.4-201ENST00000549796 1459 ntBASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 AKAP8P1-201ENST00000434743 1349 ntBASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 MIR6080-201ENST00000617359 66 ntBASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 MYCLP1-201ENST00000372451 1075 ntBASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 WASH6P-202ENST00000359512 1437 ntBASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 AC119751.2-201ENST00000504529 210 ntBASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 LINC00896-202ENST00000609602 2128 ntBASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 AC099568.2-201ENST00000609194 695 ntBASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VPS13BQ7Z7G8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC10.46□□□□□ -0.73
VPS13BQ7Z7G8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms