Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SLC27A1Q6PCB7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC27A1Q6PCB7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC27A1Q6PCB7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SLC27A1Q6PCB7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SLC27A1Q6PCB7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 ACTG1P14-201ENST00000446382 1122 ntBASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 CEND1P1-201ENST00000451006 455 ntBASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 LINC00896-202ENST00000609602 2128 ntBASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SLC27A1Q6PCB7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 AC092919.2-201ENST00000623631 1645 ntBASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 AL031432.2-201ENST00000566714 459 ntBASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 AL928711.1-201ENST00000570165 459 ntBASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 AP002472.1-201ENST00000577490 586 ntBASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 MIR4515-201ENST00000584082 81 ntBASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SLC27A1Q6PCB7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 FRMD8P1-201ENST00000440433 1524 ntBASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC27A1Q6PCB7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms