Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 EGFEM1P-202ENST00000431685 1563 ntBASIC18.13■□□□□ 0.49
VARS2Q5ST30 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 AL645728.2-201ENST00000641974 660 ntBASIC18.12■□□□□ 0.49
VARS2Q5ST30 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARS2Q5ST30 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VARS2Q5ST30 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 AC005332.8-201ENST00000622750 2735 ntBASIC18.11■□□□□ 0.49
VARS2Q5ST30 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 AC112191.1-201ENST00000523689 701 ntBASIC18.11■□□□□ 0.49
VARS2Q5ST30 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 AC016396.2-201ENST00000562575 1417 ntBASIC18.11■□□□□ 0.49
VARS2Q5ST30 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
VARS2Q5ST30 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARS2Q5ST30 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARS2Q5ST30 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARS2Q5ST30 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.1■□□□□ 0.49
VARS2Q5ST30 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VARS2Q5ST30 GNAS-203ENST00000306120 1878 ntBASIC18.1■□□□□ 0.49
VARS2Q5ST30 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VARS2Q5ST30 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms