Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.33■□□□□ 0.2
SCN2BO60939 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.33■□□□□ 0.2
SCN2BO60939 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.33■□□□□ 0.2
SCN2BO60939 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.33■□□□□ 0.2
SCN2BO60939 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN2BO60939 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.33■□□□□ 0.2
SCN2BO60939 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN2BO60939 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCN2BO60939 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN2BO60939 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN2BO60939 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.33■□□□□ 0.2
SCN2BO60939 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN2BO60939 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.33■□□□□ 0.2
SCN2BO60939 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SCN2BO60939 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN2BO60939 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SCN2BO60939 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SCN2BO60939 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCN2BO60939 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SCN2BO60939 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.33■□□□□ 0.2
SCN2BO60939 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.33■□□□□ 0.2
SCN2BO60939 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCN2BO60939 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SCN2BO60939 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.32■□□□□ 0.2
SCN2BO60939 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 AC003669.1-201ENST00000334569 611 ntBASIC16.32■□□□□ 0.2
SCN2BO60939 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.32■□□□□ 0.2
SCN2BO60939 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.32■□□□□ 0.2
SCN2BO60939 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.32■□□□□ 0.2
SCN2BO60939 AP002383.4-201ENST00000442518 975 ntBASIC16.32■□□□□ 0.2
SCN2BO60939 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.32■□□□□ 0.2
SCN2BO60939 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.32■□□□□ 0.2
SCN2BO60939 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SCN2BO60939 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.32■□□□□ 0.2
SCN2BO60939 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.32■□□□□ 0.2
SCN2BO60939 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.32■□□□□ 0.2
SCN2BO60939 AC233702.3-201ENST00000578656 1387 ntBASIC16.32■□□□□ 0.2
SCN2BO60939 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.32■□□□□ 0.2
SCN2BO60939 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SCN2BO60939 TP73-AS1-210ENST00000637775 1455 ntBASIC16.32■□□□□ 0.2
SCN2BO60939 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.32■□□□□ 0.2
SCN2BO60939 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SCN2BO60939 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.32■□□□□ 0.2
SCN2BO60939 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCN2BO60939 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.31■□□□□ 0.2
SCN2BO60939 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SCN2BO60939 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN2BO60939 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN2BO60939 INTS4P1-201ENST00000438455 1935 ntBASIC16.31■□□□□ 0.2
SCN2BO60939 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.31■□□□□ 0.2
SCN2BO60939 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN2BO60939 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.31■□□□□ 0.2
SCN2BO60939 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
SCN2BO60939 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCN2BO60939 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCN2BO60939 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SCN2BO60939 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCN2BO60939 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN2BO60939 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.31■□□□□ 0.2
SCN2BO60939 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SCN2BO60939 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN2BO60939 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SCN2BO60939 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCN2BO60939 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.31■□□□□ 0.2
SCN2BO60939 DRAXINP1-201ENST00000437611 948 ntBASIC16.31■□□□□ 0.2
SCN2BO60939 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.31■□□□□ 0.2
SCN2BO60939 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.31■□□□□ 0.2
SCN2BO60939 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SCN2BO60939 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.31■□□□□ 0.2
SCN2BO60939 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.31■□□□□ 0.2
SCN2BO60939 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN2BO60939 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCN2BO60939 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.31■□□□□ 0.2
SCN2BO60939 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SCN2BO60939 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCN2BO60939 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
SCN2BO60939 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SCN2BO60939 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN2BO60939 PMPCAP1-201ENST00000508114 1576 ntBASIC16.3■□□□□ 0.2
SCN2BO60939 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.3■□□□□ 0.2
SCN2BO60939 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCN2BO60939 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.3■□□□□ 0.2
SCN2BO60939 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCN2BO60939 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SCN2BO60939 AC092171.3-201ENST00000610122 2651 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms