Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SHISA3A0PJX4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SHISA3A0PJX4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15□□□□□ -0.01
SHISA3A0PJX4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15□□□□□ -0.01
SHISA3A0PJX4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15□□□□□ -0.01
SHISA3A0PJX4 AC097374.2-201ENST00000618617 1306 ntBASIC15□□□□□ -0.01
SHISA3A0PJX4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
SHISA3A0PJX4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SHISA3A0PJX4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15□□□□□ -0.01
SHISA3A0PJX4 KRT18P48-201ENST00000434763 852 ntBASIC15□□□□□ -0.01
SHISA3A0PJX4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15□□□□□ -0.01
SHISA3A0PJX4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15□□□□□ -0.01
SHISA3A0PJX4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15□□□□□ -0.01
SHISA3A0PJX4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
SHISA3A0PJX4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SHISA3A0PJX4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15□□□□□ -0.01
SHISA3A0PJX4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SHISA3A0PJX4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 TSPY7P-201ENST00000431358 1114 ntBASIC14.99□□□□□ -0.01
SHISA3A0PJX4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 AC010947.1-201ENST00000623454 693 ntBASIC14.99□□□□□ -0.01
SHISA3A0PJX4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHISA3A0PJX4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.98□□□□□ -0.01
SHISA3A0PJX4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 AL356309.3-201ENST00000624132 1934 ntBASIC14.98□□□□□ -0.01
SHISA3A0PJX4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHISA3A0PJX4 ECEL1P3-201ENST00000427961 737 ntBASIC14.98□□□□□ -0.01
SHISA3A0PJX4 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms