Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 AC005412.3-201ENST00000580309 715 ntBASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.23■□□□□ 0.19
CCDC187A0A096LP49 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 TUBB3P1-201ENST00000405796 1332 ntBASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 AC055876.3-201ENST00000431496 288 ntBASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 IGHV3-62-201ENST00000520057 340 ntBASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 DUX4L17-201ENST00000557360 1267 ntBASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 AC138649.4-201ENST00000612222 287 ntBASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC187A0A096LP49 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 FAM58DP-201ENST00000428076 619 ntBASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 KLF2P3-201ENST00000451977 1087 ntBASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC187A0A096LP49 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CCDC187A0A096LP49 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC187A0A096LP49 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC187A0A096LP49 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCDC187A0A096LP49 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.21■□□□□ 0.18
CCDC187A0A096LP49 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 MIR943-201ENST00000401286 94 ntBASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 AC107890.1-201ENST00000422478 521 ntBASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 RBPMS2P1-201ENST00000437762 623 ntBASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.2■□□□□ 0.18
CCDC187A0A096LP49 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms