Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AL358472.4-201ENST00000633140 710 ntBASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 AP000550.4-202ENST00000639755 178 ntBASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RNF11Q9Y3C5 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 NSUN5P1-202ENST00000421140 1535 ntBASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 NSUN5P2-203ENST00000457352 1529 ntBASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 KRT18P35-201ENST00000510488 1269 ntBASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 MIR3180-1-201ENST00000580374 94 ntBASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 MIR3180-3-201ENST00000584616 94 ntBASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF11Q9Y3C5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 AC132938.5-201ENST00000624980 1813 ntBASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 IGHV3-47-201ENST00000425060 335 ntBASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 BNIP3P18-201ENST00000593976 575 ntBASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 AD001527.2-201ENST00000622994 785 ntBASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 AL513477.1-201ENST00000602865 2407 ntBASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF11Q9Y3C5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms