Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 TP73-AS1-210ENST00000637775 1455 ntBASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRTM1Q9HBL6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 AC233702.3-201ENST00000578656 1387 ntBASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 TSSC2-201ENST00000450217 709 ntBASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 AC073592.5-201ENST00000624854 528 ntBASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRTM1Q9HBL6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 Z69720.1-201ENST00000601483 472 ntBASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 RNF216P1-203ENST00000404404 2427 ntBASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.56■□□□□ 0.24
LRTM1Q9HBL6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 GPR89P-201ENST00000407924 1495 ntBASIC16.55■□□□□ 0.24
LRTM1Q9HBL6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms