Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.54■□□□□ 0.4
RTP4Q96DX8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.54■□□□□ 0.4
RTP4Q96DX8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.54■□□□□ 0.4
RTP4Q96DX8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.54■□□□□ 0.4
RTP4Q96DX8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 AL121772.3-201ENST00000610840 674 ntBASIC17.54■□□□□ 0.4
RTP4Q96DX8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.54■□□□□ 0.4
RTP4Q96DX8 PCDHB17P-201ENST00000539533 2393 ntBASIC17.54■□□□□ 0.4
RTP4Q96DX8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.54■□□□□ 0.4
RTP4Q96DX8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.54■□□□□ 0.4
RTP4Q96DX8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTP4Q96DX8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
RTP4Q96DX8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTP4Q96DX8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTP4Q96DX8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTP4Q96DX8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTP4Q96DX8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTP4Q96DX8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTP4Q96DX8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTP4Q96DX8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTP4Q96DX8 PRYP5-201ENST00000451909 266 ntBASIC17.53■□□□□ 0.4
RTP4Q96DX8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 FOSL1P1-201ENST00000511041 816 ntBASIC17.53■□□□□ 0.4
RTP4Q96DX8 AC091304.2-201ENST00000564639 760 ntBASIC17.53■□□□□ 0.4
RTP4Q96DX8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.53■□□□□ 0.4
RTP4Q96DX8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTP4Q96DX8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTP4Q96DX8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTP4Q96DX8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 AC097637.2-201ENST00000624096 1997 ntBASIC17.53■□□□□ 0.4
RTP4Q96DX8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RTP4Q96DX8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTP4Q96DX8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTP4Q96DX8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTP4Q96DX8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTP4Q96DX8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTP4Q96DX8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTP4Q96DX8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTP4Q96DX8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTP4Q96DX8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 LINC00982-205ENST00000420957 435 ntBASIC17.52■□□□□ 0.4
RTP4Q96DX8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 KRT16P4-201ENST00000453883 522 ntBASIC17.52■□□□□ 0.4
RTP4Q96DX8 AP002490.2-201ENST00000524791 560 ntBASIC17.52■□□□□ 0.4
RTP4Q96DX8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.52■□□□□ 0.4
RTP4Q96DX8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTP4Q96DX8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTP4Q96DX8 AP005117.1-201ENST00000584346 1413 ntBASIC17.52■□□□□ 0.4
RTP4Q96DX8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTP4Q96DX8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTP4Q96DX8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTP4Q96DX8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTP4Q96DX8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RTP4Q96DX8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.51■□□□□ 0.39
RTP4Q96DX8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RTP4Q96DX8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTP4Q96DX8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.51■□□□□ 0.39
RTP4Q96DX8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.51■□□□□ 0.39
RTP4Q96DX8 NUS1P2-201ENST00000417358 873 ntBASIC17.51■□□□□ 0.39
RTP4Q96DX8 EMBP1-201ENST00000458200 901 ntBASIC17.51■□□□□ 0.39
RTP4Q96DX8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.51■□□□□ 0.39
RTP4Q96DX8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.51■□□□□ 0.39
RTP4Q96DX8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms