Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 KRT18P31-201ENST00000506277 1292 ntBASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 AGGF1P2-201ENST00000426656 2106 ntBASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 TSPY19P-201ENST00000418461 509 ntBASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 TSPY18P-201ENST00000441642 509 ntBASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 PRYP5-201ENST00000451909 266 ntBASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 AL121772.3-201ENST00000610840 674 ntBASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RHBDF1Q96CC6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 RBM17P3-201ENST00000417687 1192 ntBASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 LINC00982-205ENST00000420957 435 ntBASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RHBDF1Q96CC6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms