Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 AC018845.2-201ENST00000568326 409 ntBASIC18.11■□□□□ 0.49
TTC16Q8NEE8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 PGM5P2-202ENST00000637225 1043 ntBASIC18.11■□□□□ 0.49
TTC16Q8NEE8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 FLJ13224-201ENST00000313737 1514 ntBASIC18.11■□□□□ 0.49
TTC16Q8NEE8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 AC106820.2-201ENST00000563775 3264 ntBASIC18.11■□□□□ 0.49
TTC16Q8NEE8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC16Q8NEE8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 CRYGEP-201ENST00000412192 528 ntBASIC18.1■□□□□ 0.49
TTC16Q8NEE8 AC005104.2-201ENST00000427818 678 ntBASIC18.1■□□□□ 0.49
TTC16Q8NEE8 AC108073.2-201ENST00000464002 357 ntBASIC18.1■□□□□ 0.49
TTC16Q8NEE8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 AC040169.1-201ENST00000565382 521 ntBASIC18.1■□□□□ 0.49
TTC16Q8NEE8 STK25P1-201ENST00000585406 838 ntBASIC18.1■□□□□ 0.49
TTC16Q8NEE8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 AC055717.3-201ENST00000622967 595 ntBASIC18.1■□□□□ 0.49
TTC16Q8NEE8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC16Q8NEE8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 YBX2P1-201ENST00000394192 760 ntBASIC18.09■□□□□ 0.49
TTC16Q8NEE8 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 RPS15P9-201ENST00000494093 319 ntBASIC18.09■□□□□ 0.49
TTC16Q8NEE8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC16Q8NEE8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
TTC16Q8NEE8 AC009336.1-201ENST00000608941 1553 ntBASIC18.08■□□□□ 0.49
TTC16Q8NEE8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TTC16Q8NEE8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TTC16Q8NEE8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TTC16Q8NEE8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.08■□□□□ 0.49
TTC16Q8NEE8 AL390961.4-201ENST00000623958 2535 ntBASIC18.08■□□□□ 0.49
TTC16Q8NEE8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
TTC16Q8NEE8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
TTC16Q8NEE8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TTC16Q8NEE8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TTC16Q8NEE8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TTC16Q8NEE8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TTC16Q8NEE8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TTC16Q8NEE8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TTC16Q8NEE8 UPF3AP3-201ENST00000420996 769 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms