Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.38■□□□□ 0.37
PACS2Q86VP3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PACS2Q86VP3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PACS2Q86VP3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PACS2Q86VP3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PACS2Q86VP3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PACS2Q86VP3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PACS2Q86VP3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
PACS2Q86VP3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.37■□□□□ 0.37
PACS2Q86VP3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PACS2Q86VP3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PACS2Q86VP3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.37■□□□□ 0.37
PACS2Q86VP3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PACS2Q86VP3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PACS2Q86VP3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
PACS2Q86VP3 CFTRP2-201ENST00000634304 199 ntBASIC17.37■□□□□ 0.37
PACS2Q86VP3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.37■□□□□ 0.37
PACS2Q86VP3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.37■□□□□ 0.37
PACS2Q86VP3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.37■□□□□ 0.37
PACS2Q86VP3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PACS2Q86VP3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PACS2Q86VP3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PACS2Q86VP3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PACS2Q86VP3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PACS2Q86VP3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PACS2Q86VP3 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 LIN28AP1-201ENST00000429574 405 ntBASIC17.36■□□□□ 0.37
PACS2Q86VP3 ECEL1P2-202ENST00000465689 757 ntBASIC17.36■□□□□ 0.37
PACS2Q86VP3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 AL353719.1-201ENST00000566847 864 ntBASIC17.36■□□□□ 0.37
PACS2Q86VP3 AC010653.2-201ENST00000623505 997 ntBASIC17.36■□□□□ 0.37
PACS2Q86VP3 AP003400.6-201ENST00000624698 740 ntBASIC17.36■□□□□ 0.37
PACS2Q86VP3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PACS2Q86VP3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PACS2Q86VP3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PACS2Q86VP3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PACS2Q86VP3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PACS2Q86VP3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PACS2Q86VP3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PACS2Q86VP3 AC116353.5-201ENST00000638148 1699 ntBASIC17.36■□□□□ 0.37
PACS2Q86VP3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PACS2Q86VP3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 AL359258.3-201ENST00000622910 2331 ntBASIC17.35■□□□□ 0.37
PACS2Q86VP3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 AL137013.1-201ENST00000432946 1228 ntBASIC17.35■□□□□ 0.37
PACS2Q86VP3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 AL023803.3-201ENST00000615559 522 ntBASIC17.35■□□□□ 0.37
PACS2Q86VP3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.35■□□□□ 0.37
PACS2Q86VP3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PACS2Q86VP3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms