Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00242Q5T6M2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00242Q5T6M2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 MMP23A-201ENST00000234610 1017 ntBASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 FAM8A6P-201ENST00000407496 1135 ntBASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 SAPCD2P2-201ENST00000431719 1174 ntBASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 SNORA78-201ENST00000459373 127 ntBASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 AP003733.1-201ENST00000491725 852 ntBASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00242Q5T6M2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms