Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CEACAM3P40198 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.08□□□□□ -0.16
CEACAM3P40198 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CEACAM3P40198 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CEACAM3P40198 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CEACAM3P40198 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CEACAM3P40198 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CEACAM3P40198 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CEACAM3P40198 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CEACAM3P40198 FLJ16779-201ENST00000612722 7638 ntBASIC14.07□□□□□ -0.16
CEACAM3P40198 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
CEACAM3P40198 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CEACAM3P40198 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 AKR1C7P-201ENST00000305623 895 ntBASIC14.07□□□□□ -0.16
CEACAM3P40198 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 EMBP1-201ENST00000458200 901 ntBASIC14.07□□□□□ -0.16
CEACAM3P40198 AF186996.4-201ENST00000467186 377 ntBASIC14.07□□□□□ -0.16
CEACAM3P40198 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.07□□□□□ -0.16
CEACAM3P40198 UNC93B7-201ENST00000509439 705 ntBASIC14.07□□□□□ -0.16
CEACAM3P40198 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.07□□□□□ -0.16
CEACAM3P40198 AF238378.1-201ENST00000526806 358 ntBASIC14.07□□□□□ -0.16
CEACAM3P40198 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.07□□□□□ -0.16
CEACAM3P40198 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 NKAPP1-205ENST00000585790 367 ntBASIC14.07□□□□□ -0.16
CEACAM3P40198 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.07□□□□□ -0.16
CEACAM3P40198 AL589182.2-201ENST00000619332 1049 ntBASIC14.07□□□□□ -0.16
CEACAM3P40198 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 AL023806.1-201ENST00000603994 1649 ntBASIC14.07□□□□□ -0.16
CEACAM3P40198 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.07□□□□□ -0.16
CEACAM3P40198 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.07□□□□□ -0.16
CEACAM3P40198 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CEACAM3P40198 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.07□□□□□ -0.16
CEACAM3P40198 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CEACAM3P40198 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.07□□□□□ -0.16
CEACAM3P40198 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.07□□□□□ -0.16
CEACAM3P40198 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CEACAM3P40198 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CEACAM3P40198 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CEACAM3P40198 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CEACAM3P40198 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.06□□□□□ -0.16
CEACAM3P40198 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.06□□□□□ -0.16
CEACAM3P40198 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CEACAM3P40198 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.06□□□□□ -0.16
CEACAM3P40198 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.06□□□□□ -0.16
CEACAM3P40198 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
CEACAM3P40198 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.06□□□□□ -0.16
CEACAM3P40198 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.06□□□□□ -0.16
CEACAM3P40198 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
CEACAM3P40198 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.06□□□□□ -0.16
CEACAM3P40198 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.06□□□□□ -0.16
CEACAM3P40198 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.06□□□□□ -0.16
CEACAM3P40198 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CEACAM3P40198 BX005266.1-201ENST00000473402 457 ntBASIC14.06□□□□□ -0.16
CEACAM3P40198 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.06□□□□□ -0.16
CEACAM3P40198 AC139887.3-201ENST00000568585 713 ntBASIC14.06□□□□□ -0.16
CEACAM3P40198 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.06□□□□□ -0.16
CEACAM3P40198 MTDHP4-201ENST00000600287 670 ntBASIC14.06□□□□□ -0.16
CEACAM3P40198 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CEACAM3P40198 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.06□□□□□ -0.16
CEACAM3P40198 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CEACAM3P40198 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.06□□□□□ -0.16
CEACAM3P40198 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms