Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCKDHAP12694 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.47■□□□□ 0.23
BCKDHAP12694 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.47■□□□□ 0.23
BCKDHAP12694 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BCKDHAP12694 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCKDHAP12694 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCKDHAP12694 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCKDHAP12694 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BCKDHAP12694 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCKDHAP12694 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BCKDHAP12694 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.47■□□□□ 0.23
BCKDHAP12694 GPR89P-201ENST00000407924 1495 ntBASIC16.47■□□□□ 0.23
BCKDHAP12694 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BCKDHAP12694 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCKDHAP12694 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BCKDHAP12694 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
BCKDHAP12694 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.47■□□□□ 0.23
BCKDHAP12694 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCKDHAP12694 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCKDHAP12694 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCKDHAP12694 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BCKDHAP12694 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
BCKDHAP12694 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
BCKDHAP12694 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.46■□□□□ 0.23
BCKDHAP12694 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.46■□□□□ 0.23
BCKDHAP12694 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BCKDHAP12694 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.46■□□□□ 0.23
BCKDHAP12694 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BCKDHAP12694 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.46■□□□□ 0.23
BCKDHAP12694 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCKDHAP12694 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BCKDHAP12694 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
BCKDHAP12694 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCKDHAP12694 DRAXINP1-201ENST00000437611 948 ntBASIC16.46■□□□□ 0.23
BCKDHAP12694 AP002383.4-201ENST00000442518 975 ntBASIC16.46■□□□□ 0.23
BCKDHAP12694 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.46■□□□□ 0.23
BCKDHAP12694 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCKDHAP12694 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.46■□□□□ 0.23
BCKDHAP12694 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.46■□□□□ 0.23
BCKDHAP12694 TPSP2-201ENST00000561760 610 ntBASIC16.46■□□□□ 0.23
BCKDHAP12694 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.46■□□□□ 0.23
BCKDHAP12694 BNIP3P18-201ENST00000593976 575 ntBASIC16.46■□□□□ 0.23
BCKDHAP12694 Z69720.1-201ENST00000601483 472 ntBASIC16.46■□□□□ 0.23
BCKDHAP12694 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.46■□□□□ 0.23
BCKDHAP12694 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
BCKDHAP12694 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BCKDHAP12694 INTS4P1-201ENST00000438455 1935 ntBASIC16.46■□□□□ 0.23
BCKDHAP12694 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
BCKDHAP12694 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BCKDHAP12694 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.46■□□□□ 0.23
BCKDHAP12694 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BCKDHAP12694 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BCKDHAP12694 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
BCKDHAP12694 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.46■□□□□ 0.22
BCKDHAP12694 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
BCKDHAP12694 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BCKDHAP12694 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.46■□□□□ 0.22
BCKDHAP12694 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.45■□□□□ 0.22
BCKDHAP12694 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
BCKDHAP12694 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
BCKDHAP12694 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.45■□□□□ 0.22
BCKDHAP12694 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
BCKDHAP12694 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
BCKDHAP12694 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
BCKDHAP12694 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.45■□□□□ 0.22
BCKDHAP12694 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 KRT17P6-201ENST00000453795 1220 ntBASIC16.45■□□□□ 0.22
BCKDHAP12694 MINOS1P3-201ENST00000457048 203 ntBASIC16.45■□□□□ 0.22
BCKDHAP12694 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.45■□□□□ 0.22
BCKDHAP12694 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BCKDHAP12694 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.45■□□□□ 0.22
BCKDHAP12694 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
BCKDHAP12694 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.45■□□□□ 0.22
BCKDHAP12694 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BCKDHAP12694 NSUN5P1-202ENST00000421140 1535 ntBASIC16.45■□□□□ 0.22
BCKDHAP12694 NSUN5P2-203ENST00000457352 1529 ntBASIC16.45■□□□□ 0.22
BCKDHAP12694 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.44■□□□□ 0.22
BCKDHAP12694 AC092171.3-201ENST00000610122 2651 ntBASIC16.44■□□□□ 0.22
BCKDHAP12694 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
BCKDHAP12694 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
BCKDHAP12694 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.44■□□□□ 0.22
BCKDHAP12694 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BCKDHAP12694 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.44■□□□□ 0.22
BCKDHAP12694 PMPCAP1-201ENST00000508114 1576 ntBASIC16.44■□□□□ 0.22
BCKDHAP12694 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BCKDHAP12694 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.44■□□□□ 0.22
BCKDHAP12694 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BCKDHAP12694 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms