Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.93■□□□□ 0.14
LGI1O95970 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.93■□□□□ 0.14
LGI1O95970 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 AC003669.1-201ENST00000334569 611 ntBASIC15.93■□□□□ 0.14
LGI1O95970 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.93■□□□□ 0.14
LGI1O95970 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.93■□□□□ 0.14
LGI1O95970 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.93■□□□□ 0.14
LGI1O95970 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.93■□□□□ 0.14
LGI1O95970 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.93■□□□□ 0.14
LGI1O95970 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.93■□□□□ 0.14
LGI1O95970 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LGI1O95970 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LGI1O95970 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.93■□□□□ 0.14
LGI1O95970 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LGI1O95970 RNF216P1-203ENST00000404404 2427 ntBASIC15.93■□□□□ 0.14
LGI1O95970 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LGI1O95970 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.92■□□□□ 0.14
LGI1O95970 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.92■□□□□ 0.14
LGI1O95970 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
LGI1O95970 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
LGI1O95970 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.92■□□□□ 0.14
LGI1O95970 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.92■□□□□ 0.14
LGI1O95970 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.92■□□□□ 0.14
LGI1O95970 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LGI1O95970 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.92■□□□□ 0.14
LGI1O95970 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.92■□□□□ 0.14
LGI1O95970 UPK3BP1-201ENST00000428678 509 ntBASIC15.92■□□□□ 0.14
LGI1O95970 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.92■□□□□ 0.14
LGI1O95970 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LGI1O95970 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 AC078925.2-201ENST00000624013 1973 ntBASIC15.92■□□□□ 0.14
LGI1O95970 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LGI1O95970 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.92■□□□□ 0.14
LGI1O95970 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LGI1O95970 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LGI1O95970 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.92■□□□□ 0.14
LGI1O95970 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.92■□□□□ 0.14
LGI1O95970 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LGI1O95970 DOC2GP-204ENST00000639052 2548 ntBASIC15.92■□□□□ 0.14
LGI1O95970 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.92■□□□□ 0.14
LGI1O95970 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LGI1O95970 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LGI1O95970 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.91■□□□□ 0.14
LGI1O95970 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.91■□□□□ 0.14
LGI1O95970 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.91■□□□□ 0.14
LGI1O95970 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LGI1O95970 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 FRMD8P1-201ENST00000440433 1524 ntBASIC15.91■□□□□ 0.14
LGI1O95970 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.91■□□□□ 0.14
LGI1O95970 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.91■□□□□ 0.14
LGI1O95970 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 AC093458.2-201ENST00000623150 629 ntBASIC15.91■□□□□ 0.14
LGI1O95970 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.91■□□□□ 0.14
LGI1O95970 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LGI1O95970 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms