Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
PDCD6O75340 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
PDCD6O75340 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.56□□□□□ -0.08
PDCD6O75340 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 AC003669.1-201ENST00000334569 611 ntBASIC14.56□□□□□ -0.08
PDCD6O75340 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.56□□□□□ -0.08
PDCD6O75340 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.56□□□□□ -0.08
PDCD6O75340 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.56□□□□□ -0.08
PDCD6O75340 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 VENTXP7-201ENST00000475503 772 ntBASIC14.56□□□□□ -0.08
PDCD6O75340 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
PDCD6O75340 KRT8P26-201ENST00000534154 1276 ntBASIC14.56□□□□□ -0.08
PDCD6O75340 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.56□□□□□ -0.08
PDCD6O75340 AC009533.2-201ENST00000543664 586 ntBASIC14.56□□□□□ -0.08
PDCD6O75340 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.56□□□□□ -0.08
PDCD6O75340 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.56□□□□□ -0.08
PDCD6O75340 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
PDCD6O75340 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.56□□□□□ -0.08
PDCD6O75340 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PDCD6O75340 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 AL603756.1-201ENST00000606511 2163 ntBASIC14.56□□□□□ -0.08
PDCD6O75340 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDCD6O75340 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.56□□□□□ -0.08
PDCD6O75340 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PDCD6O75340 RNF216P1-203ENST00000404404 2427 ntBASIC14.55□□□□□ -0.08
PDCD6O75340 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.55□□□□□ -0.08
PDCD6O75340 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.55□□□□□ -0.08
PDCD6O75340 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.55□□□□□ -0.08
PDCD6O75340 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PDCD6O75340 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
PDCD6O75340 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.55□□□□□ -0.08
PDCD6O75340 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.55□□□□□ -0.08
PDCD6O75340 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PDCD6O75340 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.55□□□□□ -0.08
PDCD6O75340 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.55□□□□□ -0.08
PDCD6O75340 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.55□□□□□ -0.08
PDCD6O75340 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PDCD6O75340 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.55□□□□□ -0.08
PDCD6O75340 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.55□□□□□ -0.08
PDCD6O75340 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PDCD6O75340 GPR89P-201ENST00000407924 1495 ntBASIC14.55□□□□□ -0.08
PDCD6O75340 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PDCD6O75340 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDCD6O75340 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDCD6O75340 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.55□□□□□ -0.08
PDCD6O75340 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.54□□□□□ -0.08
PDCD6O75340 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.54□□□□□ -0.08
PDCD6O75340 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDCD6O75340 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms