Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 AC078925.2-201ENST00000624013 1973 ntBASIC16.55■□□□□ 0.24
PRAMEF4O60810 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF4O60810 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF4O60810 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF4O60810 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF4O60810 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF4O60810 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF4O60810 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF4O60810 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF4O60810 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF4O60810 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF4O60810 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF4O60810 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEF4O60810 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 SAPCD2P3-201ENST00000455031 850 ntBASIC16.54■□□□□ 0.24
PRAMEF4O60810 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF4O60810 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF4O60810 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 AC021087.4-201ENST00000563761 564 ntBASIC16.53■□□□□ 0.24
PRAMEF4O60810 AC025062.2-201ENST00000605477 670 ntBASIC16.53■□□□□ 0.24
PRAMEF4O60810 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 PCDHB17P-201ENST00000539533 2393 ntBASIC16.53■□□□□ 0.24
PRAMEF4O60810 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEF4O60810 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF4O60810 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms