Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CHD1O14646 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
CHD1O14646 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD1O14646 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1O14646 AC018665.1-201ENST00000622927 1362 ntBASIC27.37■■□□□ 1.97
CHD1O14646 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CHD1O14646 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC27.37■■□□□ 1.97
CHD1O14646 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1O14646 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC27.37■■□□□ 1.97
CHD1O14646 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1O14646 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1O14646 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC27.37■■□□□ 1.97
CHD1O14646 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC27.37■■□□□ 1.97
CHD1O14646 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
CHD1O14646 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC27.37■■□□□ 1.97
CHD1O14646 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC27.37■■□□□ 1.97
CHD1O14646 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC27.37■■□□□ 1.97
CHD1O14646 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1O14646 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC27.37■■□□□ 1.97
CHD1O14646 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.97
CHD1O14646 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1O14646 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1O14646 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1O14646 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1O14646 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1O14646 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHD1O14646 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC27.36■■□□□ 1.97
CHD1O14646 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CHD1O14646 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD1O14646 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD1O14646 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
CHD1O14646 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CHD1O14646 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC27.36■■□□□ 1.97
CHD1O14646 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC27.36■■□□□ 1.97
CHD1O14646 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC27.36■■□□□ 1.97
CHD1O14646 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC27.36■■□□□ 1.97
CHD1O14646 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC27.36■■□□□ 1.97
CHD1O14646 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD1O14646 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
CHD1O14646 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD1O14646 PDIA3P1-201ENST00000471856 1510 ntBASIC27.36■■□□□ 1.97
CHD1O14646 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CHD1O14646 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC27.36■■□□□ 1.97
CHD1O14646 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC27.36■■□□□ 1.97
CHD1O14646 AC099336.1-201ENST00000417053 1171 ntBASIC27.36■■□□□ 1.97
CHD1O14646 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
CHD1O14646 MIR4492-201ENST00000581627 80 ntBASIC27.36■■□□□ 1.97
CHD1O14646 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CHD1O14646 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC27.35■■□□□ 1.97
CHD1O14646 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC27.35■■□□□ 1.97
CHD1O14646 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
CHD1O14646 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC27.35■■□□□ 1.97
CHD1O14646 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHD1O14646 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHD1O14646 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHD1O14646 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHD1O14646 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
CHD1O14646 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CHD1O14646 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
CHD1O14646 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC27.35■■□□□ 1.97
CHD1O14646 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC27.35■■□□□ 1.97
CHD1O14646 CDK2AP2P3-201ENST00000422476 372 ntBASIC27.35■■□□□ 1.97
CHD1O14646 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC27.35■■□□□ 1.97
CHD1O14646 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
CHD1O14646 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CHD1O14646 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC27.34■■□□□ 1.97
CHD1O14646 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC27.34■■□□□ 1.97
CHD1O14646 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
CHD1O14646 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC27.34■■□□□ 1.97
CHD1O14646 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHD1O14646 RPS19-201ENST00000221975 500 ntTSL 3 BASIC27.34■■□□□ 1.97
CHD1O14646 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC27.34■■□□□ 1.97
CHD1O14646 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CHD1O14646 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC27.34■■□□□ 1.97
CHD1O14646 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC27.34■■□□□ 1.97
CHD1O14646 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
CHD1O14646 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC27.34■■□□□ 1.97
CHD1O14646 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHD1O14646 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CHD1O14646 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC27.34■■□□□ 1.97
CHD1O14646 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
CHD1O14646 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC27.34■■□□□ 1.97
CHD1O14646 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC27.33■■□□□ 1.97
CHD1O14646 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD1O14646 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD1O14646 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD1O14646 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD1O14646 APOC3-202ENST00000375345 604 ntTSL 5 BASIC27.33■■□□□ 1.97
CHD1O14646 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CHD1O14646 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC27.33■■□□□ 1.97
CHD1O14646 RBM39-205ENST00000397370 612 ntTSL 2 BASIC27.33■■□□□ 1.97
CHD1O14646 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC27.33■■□□□ 1.97
CHD1O14646 RNA5SP410-201ENST00000516285 106 ntBASIC27.33■■□□□ 1.97
CHD1O14646 RNA5SP423-201ENST00000517127 109 ntBASIC27.33■■□□□ 1.97
CHD1O14646 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC27.33■■□□□ 1.97
CHD1O14646 AC131009.4-201ENST00000624048 1740 ntBASIC27.33■■□□□ 1.97
CHD1O14646 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC27.33■■□□□ 1.97
CHD1O14646 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CHD1O14646 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC27.33■■□□□ 1.97
CHD1O14646 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms