Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.11■□□□□ 0.49
HLA-DRB4X5D2U9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRB4X5D2U9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRB4X5D2U9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRB4X5D2U9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.11■□□□□ 0.49
HLA-DRB4X5D2U9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HLA-DRB4X5D2U9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DRB4X5D2U9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRB4X5D2U9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRB4X5D2U9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRB4X5D2U9 AC092296.2-201ENST00000589470 999 ntBASIC18.1■□□□□ 0.49
HLA-DRB4X5D2U9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DRB4X5D2U9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DRB4X5D2U9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRB4X5D2U9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DRB4X5D2U9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRB4X5D2U9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.09■□□□□ 0.49
HLA-DRB4X5D2U9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRB4X5D2U9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRB4X5D2U9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRB4X5D2U9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DRB4X5D2U9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.08■□□□□ 0.49
HLA-DRB4X5D2U9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
HLA-DRB4X5D2U9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DRB4X5D2U9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
HLA-DRB4X5D2U9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRB4X5D2U9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HLA-DRB4X5D2U9 AC093323.1-202ENST00000635031 2045 ntBASIC18.07■□□□□ 0.48
HLA-DRB4X5D2U9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DRB4X5D2U9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DRB4X5D2U9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRB4X5D2U9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRB4X5D2U9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRB4X5D2U9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HLA-DRB4X5D2U9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DRB4X5D2U9 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DRB4X5D2U9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRB4X5D2U9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DRB4X5D2U9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.06■□□□□ 0.48
HLA-DRB4X5D2U9 GPX1-201ENST00000419349 1106 ntBASIC18.06■□□□□ 0.48
HLA-DRB4X5D2U9 ECEL1P2-201ENST00000461596 1295 ntBASIC18.06■□□□□ 0.48
HLA-DRB4X5D2U9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRB4X5D2U9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.06■□□□□ 0.48
HLA-DRB4X5D2U9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRB4X5D2U9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HLA-DRB4X5D2U9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRB4X5D2U9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRB4X5D2U9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.05■□□□□ 0.48
HLA-DRB4X5D2U9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRB4X5D2U9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
HLA-DRB4X5D2U9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.05■□□□□ 0.48
HLA-DRB4X5D2U9 AC025884.2-201ENST00000553429 711 ntBASIC18.05■□□□□ 0.48
HLA-DRB4X5D2U9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HLA-DRB4X5D2U9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.05■□□□□ 0.48
HLA-DRB4X5D2U9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HLA-DRB4X5D2U9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRB4X5D2U9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRB4X5D2U9 AC092803.2-201ENST00000564287 1899 ntBASIC18.04■□□□□ 0.48
HLA-DRB4X5D2U9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRB4X5D2U9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.04■□□□□ 0.48
HLA-DRB4X5D2U9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HLA-DRB4X5D2U9 AC091060.1-201ENST00000623524 1766 ntBASIC18.04■□□□□ 0.48
HLA-DRB4X5D2U9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.04■□□□□ 0.48
HLA-DRB4X5D2U9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HLA-DRB4X5D2U9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRB4X5D2U9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRB4X5D2U9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRB4X5D2U9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HLA-DRB4X5D2U9 SMPD5-203ENST00000639008 1464 ntBASIC18.03■□□□□ 0.48
HLA-DRB4X5D2U9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.03■□□□□ 0.48
HLA-DRB4X5D2U9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRB4X5D2U9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
HLA-DRB4X5D2U9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRB4X5D2U9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRB4X5D2U9 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.02■□□□□ 0.48
HLA-DRB4X5D2U9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HLA-DRB4X5D2U9 MIR3960-201ENST00000583311 91 ntBASIC18.02■□□□□ 0.48
HLA-DRB4X5D2U9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.02■□□□□ 0.47
HLA-DRB4X5D2U9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HLA-DRB4X5D2U9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.02■□□□□ 0.47
HLA-DRB4X5D2U9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.02■□□□□ 0.47
HLA-DRB4X5D2U9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.01■□□□□ 0.47
HLA-DRB4X5D2U9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.01■□□□□ 0.47
HLA-DRB4X5D2U9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DRB4X5D2U9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.01■□□□□ 0.47
HLA-DRB4X5D2U9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DRB4X5D2U9 AC145676.1-201ENST00000514988 2004 ntBASIC18.01■□□□□ 0.47
HLA-DRB4X5D2U9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HLA-DRB4X5D2U9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HLA-DRB4X5D2U9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRB4X5D2U9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HLA-DRB4X5D2U9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DRB4X5D2U9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HLA-DRB4X5D2U9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18■□□□□ 0.47
HLA-DRB4X5D2U9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HLA-DRB4X5D2U9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms