Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PTCH2Q9Y6C5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PTCH2Q9Y6C5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PTCH2Q9Y6C5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PTCH2Q9Y6C5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
PTCH2Q9Y6C5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.83■■■□□ 2.05
PTCH2Q9Y6C5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.83■■■□□ 2.05
PTCH2Q9Y6C5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC27.83■■■□□ 2.05
PTCH2Q9Y6C5 AC005837.3-201ENST00000612163 286 ntBASIC27.83■■■□□ 2.05
PTCH2Q9Y6C5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
PTCH2Q9Y6C5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PTCH2Q9Y6C5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
PTCH2Q9Y6C5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
PTCH2Q9Y6C5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.82■■■□□ 2.04
PTCH2Q9Y6C5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.82■■■□□ 2.04
PTCH2Q9Y6C5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.82■■■□□ 2.04
PTCH2Q9Y6C5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
PTCH2Q9Y6C5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PTCH2Q9Y6C5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PTCH2Q9Y6C5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PTCH2Q9Y6C5 AC022616.5-201ENST00000518796 181 ntBASIC27.81■■■□□ 2.04
PTCH2Q9Y6C5 AC137630.3-201ENST00000607245 391 ntBASIC27.81■■■□□ 2.04
PTCH2Q9Y6C5 AC092666.2-201ENST00000613287 246 ntBASIC27.81■■■□□ 2.04
PTCH2Q9Y6C5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PTCH2Q9Y6C5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PTCH2Q9Y6C5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PTCH2Q9Y6C5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PTCH2Q9Y6C5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.8■■■□□ 2.04
PTCH2Q9Y6C5 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.8■■■□□ 2.04
PTCH2Q9Y6C5 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PTCH2Q9Y6C5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.79■■■□□ 2.04
PTCH2Q9Y6C5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PTCH2Q9Y6C5 AC021242.3-201ENST00000607598 1377 ntBASIC27.79■■■□□ 2.04
PTCH2Q9Y6C5 KRT18P24-201ENST00000344739 1156 ntBASIC27.79■■■□□ 2.04
PTCH2Q9Y6C5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.79■■■□□ 2.04
PTCH2Q9Y6C5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
PTCH2Q9Y6C5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
PTCH2Q9Y6C5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
PTCH2Q9Y6C5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
PTCH2Q9Y6C5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
PTCH2Q9Y6C5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.78■■■□□ 2.04
PTCH2Q9Y6C5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.78■■■□□ 2.04
PTCH2Q9Y6C5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.78■■■□□ 2.04
PTCH2Q9Y6C5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.77■■■□□ 2.04
PTCH2Q9Y6C5 ST7-AS1-201ENST00000456775 1889 ntBASIC27.77■■■□□ 2.04
PTCH2Q9Y6C5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
PTCH2Q9Y6C5 AP002414.2-202ENST00000590929 1450 ntBASIC27.76■■■□□ 2.04
PTCH2Q9Y6C5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
PTCH2Q9Y6C5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PTCH2Q9Y6C5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PTCH2Q9Y6C5 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PTCH2Q9Y6C5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PTCH2Q9Y6C5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PTCH2Q9Y6C5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PTCH2Q9Y6C5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
PTCH2Q9Y6C5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
PTCH2Q9Y6C5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.74■■■□□ 2.03
PTCH2Q9Y6C5 AC096631.2-201ENST00000436136 790 ntBASIC27.74■■■□□ 2.03
PTCH2Q9Y6C5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.74■■■□□ 2.03
PTCH2Q9Y6C5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC27.74■■■□□ 2.03
PTCH2Q9Y6C5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.74■■■□□ 2.03
PTCH2Q9Y6C5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.74■■■□□ 2.03
PTCH2Q9Y6C5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC27.73■■■□□ 2.03
PTCH2Q9Y6C5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.73■■■□□ 2.03
PTCH2Q9Y6C5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC27.73■■■□□ 2.03
PTCH2Q9Y6C5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.73■■■□□ 2.03
PTCH2Q9Y6C5 AC092028.1-203ENST00000608262 953 ntBASIC27.73■■■□□ 2.03
PTCH2Q9Y6C5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
PTCH2Q9Y6C5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
PTCH2Q9Y6C5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.72■■■□□ 2.03
PTCH2Q9Y6C5 AL117332.1-201ENST00000622628 974 ntBASIC27.72■■■□□ 2.03
PTCH2Q9Y6C5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PTCH2Q9Y6C5 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
PTCH2Q9Y6C5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.71■■■□□ 2.03
PTCH2Q9Y6C5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.71■■■□□ 2.03
PTCH2Q9Y6C5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
PTCH2Q9Y6C5 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.7■■■□□ 2.03
PTCH2Q9Y6C5 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.7■■■□□ 2.03
PTCH2Q9Y6C5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.7■■■□□ 2.03
PTCH2Q9Y6C5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.7■■■□□ 2.02
PTCH2Q9Y6C5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
PTCH2Q9Y6C5 WHAMMP3-201ENST00000611636 1609 ntBASIC27.7■■■□□ 2.02
PTCH2Q9Y6C5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
PTCH2Q9Y6C5 ABCB10P3-201ENST00000561950 2166 ntBASIC27.69■■■□□ 2.02
PTCH2Q9Y6C5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC27.69■■■□□ 2.02
PTCH2Q9Y6C5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.69■■■□□ 2.02
PTCH2Q9Y6C5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC27.69■■■□□ 2.02
PTCH2Q9Y6C5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.69■■■□□ 2.02
PTCH2Q9Y6C5 RARRES2P6-201ENST00000567333 442 ntBASIC27.69■■■□□ 2.02
PTCH2Q9Y6C5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC27.68■■■□□ 2.02
PTCH2Q9Y6C5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.68■■■□□ 2.02
PTCH2Q9Y6C5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PTCH2Q9Y6C5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.68■■■□□ 2.02
PTCH2Q9Y6C5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
PTCH2Q9Y6C5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PTCH2Q9Y6C5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
PTCH2Q9Y6C5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.66■■■□□ 2.02
PTCH2Q9Y6C5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.66■■■□□ 2.02
PTCH2Q9Y6C5 AC120024.1-201ENST00000562672 995 ntBASIC27.66■■■□□ 2.02
PTCH2Q9Y6C5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.66■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms