Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA2Q9Y5H9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA2Q9Y5H9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.27■■□□□ 1.96
PCDHA2Q9Y5H9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHA2Q9Y5H9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
PCDHA2Q9Y5H9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA2Q9Y5H9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA2Q9Y5H9 SPCS2P3-201ENST00000500401 656 ntBASIC27.26■■□□□ 1.95
PCDHA2Q9Y5H9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHA2Q9Y5H9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
PCDHA2Q9Y5H9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHA2Q9Y5H9 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHA2Q9Y5H9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.25■■□□□ 1.95
PCDHA2Q9Y5H9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.25■■□□□ 1.95
PCDHA2Q9Y5H9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA2Q9Y5H9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
PCDHA2Q9Y5H9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA2Q9Y5H9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA2Q9Y5H9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.24■■□□□ 1.95
PCDHA2Q9Y5H9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
PCDHA2Q9Y5H9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.24■■□□□ 1.95
PCDHA2Q9Y5H9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHA2Q9Y5H9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.23■■□□□ 1.95
PCDHA2Q9Y5H9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
PCDHA2Q9Y5H9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHA2Q9Y5H9 RARRES2P1-201ENST00000474487 481 ntBASIC27.22■■□□□ 1.95
PCDHA2Q9Y5H9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
PCDHA2Q9Y5H9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHA2Q9Y5H9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.2■■□□□ 1.95
PCDHA2Q9Y5H9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.2■■□□□ 1.95
PCDHA2Q9Y5H9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
PCDHA2Q9Y5H9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA2Q9Y5H9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.19■■□□□ 1.94
PCDHA2Q9Y5H9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA2Q9Y5H9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA2Q9Y5H9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA2Q9Y5H9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.19■■□□□ 1.94
PCDHA2Q9Y5H9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
PCDHA2Q9Y5H9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA2Q9Y5H9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA2Q9Y5H9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA2Q9Y5H9 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHA2Q9Y5H9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.18■■□□□ 1.94
PCDHA2Q9Y5H9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHA2Q9Y5H9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.18■■□□□ 1.94
PCDHA2Q9Y5H9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDHA2Q9Y5H9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.18■■□□□ 1.94
PCDHA2Q9Y5H9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA2Q9Y5H9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDHA2Q9Y5H9 MIR6765-201ENST00000614092 87 ntBASIC27.17■■□□□ 1.94
PCDHA2Q9Y5H9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
PCDHA2Q9Y5H9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.17■■□□□ 1.94
PCDHA2Q9Y5H9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDHA2Q9Y5H9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
PCDHA2Q9Y5H9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDHA2Q9Y5H9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.15■■□□□ 1.94
PCDHA2Q9Y5H9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHA2Q9Y5H9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDHA2Q9Y5H9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDHA2Q9Y5H9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA2Q9Y5H9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA2Q9Y5H9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDHA2Q9Y5H9 AC018755.3-202ENST00000596210 929 ntBASIC27.14■■□□□ 1.94
PCDHA2Q9Y5H9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.13■■□□□ 1.93
PCDHA2Q9Y5H9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.13■■□□□ 1.93
PCDHA2Q9Y5H9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC27.12■■□□□ 1.93
PCDHA2Q9Y5H9 AC091060.1-201ENST00000623524 1766 ntBASIC27.12■■□□□ 1.93
PCDHA2Q9Y5H9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.12■■□□□ 1.93
PCDHA2Q9Y5H9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.12■■□□□ 1.93
PCDHA2Q9Y5H9 AC074183.2-201ENST00000623112 922 ntBASIC27.12■■□□□ 1.93
PCDHA2Q9Y5H9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA2Q9Y5H9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PCDHA2Q9Y5H9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHA2Q9Y5H9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHA2Q9Y5H9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHA2Q9Y5H9 BHLHE23-202ENST00000612929 1109 ntBASIC27.11■■□□□ 1.93
PCDHA2Q9Y5H9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
PCDHA2Q9Y5H9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PCDHA2Q9Y5H9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.11■■□□□ 1.93
PCDHA2Q9Y5H9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHA2Q9Y5H9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHA2Q9Y5H9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHA2Q9Y5H9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHA2Q9Y5H9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
PCDHA2Q9Y5H9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHA2Q9Y5H9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.09■■□□□ 1.93
PCDHA2Q9Y5H9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHA2Q9Y5H9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC27.09■■□□□ 1.93
PCDHA2Q9Y5H9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
PCDHA2Q9Y5H9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA2Q9Y5H9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA2Q9Y5H9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA2Q9Y5H9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA2Q9Y5H9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.08■■□□□ 1.93
PCDHA2Q9Y5H9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.08■■□□□ 1.93
PCDHA2Q9Y5H9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.08■■□□□ 1.93
PCDHA2Q9Y5H9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.08■■□□□ 1.93
PCDHA2Q9Y5H9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
PCDHA2Q9Y5H9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PCDHA2Q9Y5H9 AC010980.1-201ENST00000587192 1142 ntBASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms