Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
RIMBP3Q9UFD9 KRT18P24-201ENST00000344739 1156 ntBASIC39.94■■■■□ 3.98
RIMBP3Q9UFD9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC39.94■■■■□ 3.98
RIMBP3Q9UFD9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC39.94■■■■□ 3.98
RIMBP3Q9UFD9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC39.93■■■■□ 3.98
RIMBP3Q9UFD9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC39.92■■■■□ 3.98
RIMBP3Q9UFD9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC39.92■■■■□ 3.98
RIMBP3Q9UFD9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC39.92■■■■□ 3.98
RIMBP3Q9UFD9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 PBX2P1-201ENST00000493219 1291 ntBASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
RIMBP3Q9UFD9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.98
RIMBP3Q9UFD9 RARRES2P11-201ENST00000635158 484 ntBASIC39.9■■■■□ 3.98
RIMBP3Q9UFD9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC39.88■■■■□ 3.97
RIMBP3Q9UFD9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC39.88■■■■□ 3.97
RIMBP3Q9UFD9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC39.88■■■■□ 3.97
RIMBP3Q9UFD9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC39.87■■■■□ 3.97
RIMBP3Q9UFD9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC39.87■■■■□ 3.97
RIMBP3Q9UFD9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC39.87■■■■□ 3.97
RIMBP3Q9UFD9 RASSF1-AS1-201ENST00000629828 790 ntBASIC39.87■■■■□ 3.97
RIMBP3Q9UFD9 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC39.86■■■■□ 3.97
RIMBP3Q9UFD9 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
RIMBP3Q9UFD9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
RIMBP3Q9UFD9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
RIMBP3Q9UFD9 AC097381.1-201ENST00000429019 1296 ntBASIC39.86■■■■□ 3.97
RIMBP3Q9UFD9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC39.86■■■■□ 3.97
RIMBP3Q9UFD9 AC105265.2-201ENST00000467189 838 ntBASIC39.85■■■■□ 3.97
RIMBP3Q9UFD9 AC010997.5-201ENST00000609182 354 ntBASIC39.85■■■■□ 3.97
RIMBP3Q9UFD9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC39.84■■■■□ 3.97
RIMBP3Q9UFD9 AL356740.2-201ENST00000601559 647 ntBASIC39.84■■■■□ 3.97
RIMBP3Q9UFD9 AC087623.3-201ENST00000607047 1098 ntBASIC39.84■■■■□ 3.97
RIMBP3Q9UFD9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC39.84■■■■□ 3.97
RIMBP3Q9UFD9 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
RIMBP3Q9UFD9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC39.83■■■■□ 3.97
RIMBP3Q9UFD9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
RIMBP3Q9UFD9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC39.83■■■■□ 3.97
RIMBP3Q9UFD9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
RIMBP3Q9UFD9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
RIMBP3Q9UFD9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC39.82■■■■□ 3.96
RIMBP3Q9UFD9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
RIMBP3Q9UFD9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
RIMBP3Q9UFD9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC39.81■■■■□ 3.96
RIMBP3Q9UFD9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC39.81■■■■□ 3.96
RIMBP3Q9UFD9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC39.8■■■■□ 3.96
RIMBP3Q9UFD9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC39.8■■■■□ 3.96
RIMBP3Q9UFD9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
RIMBP3Q9UFD9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC39.8■■■■□ 3.96
RIMBP3Q9UFD9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC39.8■■■■□ 3.96
RIMBP3Q9UFD9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC39.8■■■■□ 3.96
RIMBP3Q9UFD9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC39.78■■■■□ 3.96
RIMBP3Q9UFD9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC39.77■■■■□ 3.96
RIMBP3Q9UFD9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC39.76■■■■□ 3.96
RIMBP3Q9UFD9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC39.76■■■■□ 3.96
RIMBP3Q9UFD9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
RIMBP3Q9UFD9 MTDHP2-201ENST00000601468 714 ntBASIC39.76■■■■□ 3.95
RIMBP3Q9UFD9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC39.75■■■■□ 3.95
RIMBP3Q9UFD9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC39.75■■■■□ 3.95
RIMBP3Q9UFD9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC39.74■■■■□ 3.95
RIMBP3Q9UFD9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
RIMBP3Q9UFD9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC39.73■■■■□ 3.95
RIMBP3Q9UFD9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC39.73■■■■□ 3.95
RIMBP3Q9UFD9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC39.73■■■■□ 3.95
RIMBP3Q9UFD9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC39.73■■■■□ 3.95
RIMBP3Q9UFD9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
RIMBP3Q9UFD9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC39.72■■■■□ 3.95
RIMBP3Q9UFD9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC39.72■■■■□ 3.95
RIMBP3Q9UFD9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
RIMBP3Q9UFD9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
RIMBP3Q9UFD9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
RIMBP3Q9UFD9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
RIMBP3Q9UFD9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC39.69■■■■□ 3.94
RIMBP3Q9UFD9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC39.69■■■■□ 3.94
RIMBP3Q9UFD9 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
RIMBP3Q9UFD9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC39.67■■■■□ 3.94
RIMBP3Q9UFD9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC39.67■■■■□ 3.94
RIMBP3Q9UFD9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
RIMBP3Q9UFD9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
RIMBP3Q9UFD9 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
RIMBP3Q9UFD9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC39.66■■■■□ 3.94
RIMBP3Q9UFD9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC39.66■■■■□ 3.94
RIMBP3Q9UFD9 AC120024.1-201ENST00000562672 995 ntBASIC39.66■■■■□ 3.94
RIMBP3Q9UFD9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
RIMBP3Q9UFD9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC39.65■■■■□ 3.94
RIMBP3Q9UFD9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC39.65■■■■□ 3.94
RIMBP3Q9UFD9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
RIMBP3Q9UFD9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
RIMBP3Q9UFD9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
RIMBP3Q9UFD9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC39.64■■■■□ 3.94
RIMBP3Q9UFD9 AK3-203ENST00000447596 705 ntTSL 2 BASIC39.64■■■■□ 3.94
RIMBP3Q9UFD9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC39.64■■■■□ 3.94
RIMBP3Q9UFD9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC39.63■■■■□ 3.94
RIMBP3Q9UFD9 AL359504.2-201ENST00000605506 1601 ntBASIC39.63■■■■□ 3.94
RIMBP3Q9UFD9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC39.63■■■■□ 3.93
RIMBP3Q9UFD9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC39.62■■■■□ 3.93
RIMBP3Q9UFD9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC39.62■■■■□ 3.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms