Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C12orf4Q9NQ89 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C12orf4Q9NQ89 AC012676.1-201ENST00000574705 1949 ntBASIC20.7■□□□□ 0.91
C12orf4Q9NQ89 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
C12orf4Q9NQ89 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C12orf4Q9NQ89 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C12orf4Q9NQ89 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C12orf4Q9NQ89 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C12orf4Q9NQ89 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C12orf4Q9NQ89 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.7■□□□□ 0.9
C12orf4Q9NQ89 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
C12orf4Q9NQ89 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 AC079834.2-201ENST00000609776 1949 ntBASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.68■□□□□ 0.9
C12orf4Q9NQ89 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.67■□□□□ 0.9
C12orf4Q9NQ89 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
C12orf4Q9NQ89 AC021231.2-201ENST00000594613 730 ntBASIC20.67■□□□□ 0.9
C12orf4Q9NQ89 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
C12orf4Q9NQ89 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C12orf4Q9NQ89 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C12orf4Q9NQ89 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 DUX4L29-201ENST00000425409 679 ntBASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C12orf4Q9NQ89 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
C12orf4Q9NQ89 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.64■□□□□ 0.9
C12orf4Q9NQ89 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
C12orf4Q9NQ89 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf4Q9NQ89 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf4Q9NQ89 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf4Q9NQ89 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf4Q9NQ89 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C12orf4Q9NQ89 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C12orf4Q9NQ89 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
C12orf4Q9NQ89 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
C12orf4Q9NQ89 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.61■□□□□ 0.89
C12orf4Q9NQ89 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C12orf4Q9NQ89 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C12orf4Q9NQ89 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C12orf4Q9NQ89 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms