Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PPP1R3EQ9H7J1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PPP1R3EQ9H7J1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
PPP1R3EQ9H7J1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PPP1R3EQ9H7J1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.36■■□□□ 1.01
PPP1R3EQ9H7J1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PPP1R3EQ9H7J1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3EQ9H7J1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3EQ9H7J1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3EQ9H7J1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PPP1R3EQ9H7J1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3EQ9H7J1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3EQ9H7J1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3EQ9H7J1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3EQ9H7J1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3EQ9H7J1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3EQ9H7J1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PPP1R3EQ9H7J1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
PPP1R3EQ9H7J1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PPP1R3EQ9H7J1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
PPP1R3EQ9H7J1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PPP1R3EQ9H7J1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP1R3EQ9H7J1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP1R3EQ9H7J1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP1R3EQ9H7J1 HLA-V-202ENST00000446817 847 ntBASIC21.34■■□□□ 1.01
PPP1R3EQ9H7J1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PPP1R3EQ9H7J1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PPP1R3EQ9H7J1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.33■■□□□ 1.01
PPP1R3EQ9H7J1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.33■■□□□ 1.01
PPP1R3EQ9H7J1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
PPP1R3EQ9H7J1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.33■■□□□ 1
PPP1R3EQ9H7J1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP1R3EQ9H7J1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PPP1R3EQ9H7J1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PPP1R3EQ9H7J1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.32■■□□□ 1
PPP1R3EQ9H7J1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PPP1R3EQ9H7J1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PPP1R3EQ9H7J1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.32■■□□□ 1
PPP1R3EQ9H7J1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3EQ9H7J1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3EQ9H7J1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3EQ9H7J1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PPP1R3EQ9H7J1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PPP1R3EQ9H7J1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.31■■□□□ 1
PPP1R3EQ9H7J1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.31■■□□□ 1
PPP1R3EQ9H7J1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PPP1R3EQ9H7J1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.3■■□□□ 1
PPP1R3EQ9H7J1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.3■■□□□ 1
PPP1R3EQ9H7J1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
PPP1R3EQ9H7J1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PPP1R3EQ9H7J1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PPP1R3EQ9H7J1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.29■■□□□ 1
PPP1R3EQ9H7J1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.29■■□□□ 1
PPP1R3EQ9H7J1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.29■■□□□ 1
PPP1R3EQ9H7J1 MIR3648-2-201ENST00000581792 180 ntBASIC21.29■■□□□ 1
PPP1R3EQ9H7J1 MIR3648-1-201ENST00000615959 180 ntBASIC21.29■■□□□ 1
PPP1R3EQ9H7J1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PPP1R3EQ9H7J1 AC138932.3-201ENST00000567634 1902 ntBASIC21.29■■□□□ 1
PPP1R3EQ9H7J1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PPP1R3EQ9H7J1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.29■■□□□ 1
PPP1R3EQ9H7J1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.28■■□□□ 1
PPP1R3EQ9H7J1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PPP1R3EQ9H7J1 AC016575.1-201ENST00000607026 382 ntBASIC21.28■■□□□ 1
PPP1R3EQ9H7J1 MIR7108-201ENST00000614319 87 ntBASIC21.28■■□□□ 1
PPP1R3EQ9H7J1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.28■■□□□ 1
PPP1R3EQ9H7J1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP1R3EQ9H7J1 WHAMMP3-201ENST00000611636 1609 ntBASIC21.28■■□□□ 1
PPP1R3EQ9H7J1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP1R3EQ9H7J1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PPP1R3EQ9H7J1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.27■■□□□ 1
PPP1R3EQ9H7J1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.27■■□□□ 1
PPP1R3EQ9H7J1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.27■■□□□ 1
PPP1R3EQ9H7J1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.27■■□□□ 1
PPP1R3EQ9H7J1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PPP1R3EQ9H7J1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PPP1R3EQ9H7J1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.27■■□□□ 1
PPP1R3EQ9H7J1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.27■■□□□ 1
PPP1R3EQ9H7J1 MIR219A2-201ENST00000608502 1504 ntBASIC21.27■■□□□ 1
PPP1R3EQ9H7J1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PPP1R3EQ9H7J1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PPP1R3EQ9H7J1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.27■□□□□ 0.99
PPP1R3EQ9H7J1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP1R3EQ9H7J1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP1R3EQ9H7J1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP1R3EQ9H7J1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PPP1R3EQ9H7J1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PPP1R3EQ9H7J1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PPP1R3EQ9H7J1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.26■□□□□ 0.99
PPP1R3EQ9H7J1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PPP1R3EQ9H7J1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
PPP1R3EQ9H7J1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PPP1R3EQ9H7J1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PPP1R3EQ9H7J1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.25■□□□□ 0.99
PPP1R3EQ9H7J1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.25■□□□□ 0.99
PPP1R3EQ9H7J1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PPP1R3EQ9H7J1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PPP1R3EQ9H7J1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PPP1R3EQ9H7J1 AC022211.4-201ENST00000625094 2161 ntBASIC21.24■□□□□ 0.99
PPP1R3EQ9H7J1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PPP1R3EQ9H7J1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms