Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.47■■□□□ 1.83
RNF39Q9H2S5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.47■■□□□ 1.83
RNF39Q9H2S5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.47■■□□□ 1.83
RNF39Q9H2S5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RNF39Q9H2S5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RNF39Q9H2S5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RNF39Q9H2S5 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC26.46■■□□□ 1.83
RNF39Q9H2S5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
RNF39Q9H2S5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
RNF39Q9H2S5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.45■■□□□ 1.82
RNF39Q9H2S5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RNF39Q9H2S5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RNF39Q9H2S5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.45■■□□□ 1.82
RNF39Q9H2S5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.45■■□□□ 1.82
RNF39Q9H2S5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RNF39Q9H2S5 PVT1_1.1-201ENST00000615125 194 ntBASIC26.44■■□□□ 1.82
RNF39Q9H2S5 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.44■■□□□ 1.82
RNF39Q9H2S5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
RNF39Q9H2S5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.43■■□□□ 1.82
RNF39Q9H2S5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RNF39Q9H2S5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RNF39Q9H2S5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RNF39Q9H2S5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF39Q9H2S5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RNF39Q9H2S5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.42■■□□□ 1.82
RNF39Q9H2S5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.42■■□□□ 1.82
RNF39Q9H2S5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF39Q9H2S5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF39Q9H2S5 AC142472.1-201ENST00000612013 1741 ntBASIC26.42■■□□□ 1.82
RNF39Q9H2S5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF39Q9H2S5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RNF39Q9H2S5 AC139795.1-202ENST00000500444 432 ntBASIC26.41■■□□□ 1.82
RNF39Q9H2S5 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC26.41■■□□□ 1.82
RNF39Q9H2S5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.41■■□□□ 1.82
RNF39Q9H2S5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.41■■□□□ 1.82
RNF39Q9H2S5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF39Q9H2S5 AP004609.3-201ENST00000610705 1884 ntBASIC26.4■■□□□ 1.82
RNF39Q9H2S5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF39Q9H2S5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF39Q9H2S5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF39Q9H2S5 AC012497.1-201ENST00000429392 575 ntBASIC26.4■■□□□ 1.82
RNF39Q9H2S5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RNF39Q9H2S5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.39■■□□□ 1.82
RNF39Q9H2S5 KRT8P33-201ENST00000508125 1423 ntBASIC26.39■■□□□ 1.82
RNF39Q9H2S5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RNF39Q9H2S5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RNF39Q9H2S5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.39■■□□□ 1.82
RNF39Q9H2S5 AP003400.6-201ENST00000624698 740 ntBASIC26.39■■□□□ 1.82
RNF39Q9H2S5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RNF39Q9H2S5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF39Q9H2S5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC26.38■■□□□ 1.81
RNF39Q9H2S5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.38■■□□□ 1.81
RNF39Q9H2S5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.38■■□□□ 1.81
RNF39Q9H2S5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF39Q9H2S5 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF39Q9H2S5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF39Q9H2S5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.37■■□□□ 1.81
RNF39Q9H2S5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
RNF39Q9H2S5 AC103834.1-201ENST00000520383 144 ntBASIC26.37■■□□□ 1.81
RNF39Q9H2S5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RNF39Q9H2S5 AC074183.2-201ENST00000623112 922 ntBASIC26.37■■□□□ 1.81
RNF39Q9H2S5 AC022726.2-201ENST00000634673 547 ntBASIC26.37■■□□□ 1.81
RNF39Q9H2S5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.37■■□□□ 1.81
RNF39Q9H2S5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF39Q9H2S5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.36■■□□□ 1.81
RNF39Q9H2S5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.36■■□□□ 1.81
RNF39Q9H2S5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.36■■□□□ 1.81
RNF39Q9H2S5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF39Q9H2S5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RNF39Q9H2S5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF39Q9H2S5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF39Q9H2S5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF39Q9H2S5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF39Q9H2S5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.35■■□□□ 1.81
RNF39Q9H2S5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.35■■□□□ 1.81
RNF39Q9H2S5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF39Q9H2S5 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.34■■□□□ 1.81
RNF39Q9H2S5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF39Q9H2S5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RNF39Q9H2S5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF39Q9H2S5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNF39Q9H2S5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RNF39Q9H2S5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.33■■□□□ 1.81
RNF39Q9H2S5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.8
RNF39Q9H2S5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.32■■□□□ 1.8
RNF39Q9H2S5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF39Q9H2S5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF39Q9H2S5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF39Q9H2S5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF39Q9H2S5 AL451085.2-201ENST00000605085 799 ntBASIC26.31■■□□□ 1.8
RNF39Q9H2S5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.31■■□□□ 1.8
RNF39Q9H2S5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.3■■□□□ 1.8
RNF39Q9H2S5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.3■■□□□ 1.8
RNF39Q9H2S5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.3■■□□□ 1.8
RNF39Q9H2S5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RNF39Q9H2S5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.3■■□□□ 1.8
RNF39Q9H2S5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF39Q9H2S5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.3■■□□□ 1.8
RNF39Q9H2S5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RNF39Q9H2S5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms