Protein–RNA interactions for Protein: Q9C0B1

FTO, Alpha-ketoglutarate-dependent dioxygenase FTO, humanhuman

Known RBP eCLIP

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FTOQ9C0B1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.617e-8■■■■□ 20.3
FTOQ9C0B1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.497e-8■■■■□ 20.3
FTOQ9C0B1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.467e-8■■■■□ 20.3
FTOQ9C0B1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.12■■□□□ 1.297e-8■■■■□ 20.3
FTOQ9C0B1 NDUFB2-211ENST00000476181 660 ntTSL 1 (best)19.25■□□□□ 0.677e-8■■■■□ 20.3
FTOQ9C0B1 NDUFB2-205ENST00000464564 469 ntTSL 518.98■□□□□ 0.637e-8■■■■□ 20.3
FTOQ9C0B1 NDUFB2-206ENST00000464566 726 ntTSL 313.04□□□□□ -0.327e-8■■■■□ 20.3
FTOQ9C0B1 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC8.26□□□□□ -1.097e-8■■■■□ 20.3
FTOQ9C0B1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.34■■■□□ 2.292e-6■■■■□ 20.3
FTOQ9C0B1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.812e-6■■■■□ 20.3
FTOQ9C0B1 ASPSCR1-221ENST00000585274 984 ntTSL 520.73■□□□□ 0.912e-6■■■■□ 20.2
FTOQ9C0B1 ASPSCR1-218ENST00000583744 539 ntTSL 417.77■□□□□ 0.442e-6■■■■□ 20.2
FTOQ9C0B1 ASPSCR1-206ENST00000578361 590 ntTSL 217.52■□□□□ 0.42e-6■■■■□ 20.2
FTOQ9C0B1 ASPSCR1-215ENST00000583142 532 ntTSL 312.99□□□□□ -0.332e-6■■■■□ 20.2
FTOQ9C0B1 MMP17-210ENST00000545671 775 ntTSL 327.65■■■□□ 2.022e-6■■■■□ 20.2
FTOQ9C0B1 MMP17-211ENST00000545790 552 ntTSL 226.16■■□□□ 1.782e-6■■■■□ 20.2
FTOQ9C0B1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.442e-6■■■■□ 20.2
FTOQ9C0B1 PDHA1-207ENST00000423505 731 ntTSL 220.71■□□□□ 0.911e-6■■■■□ 20.1
FTOQ9C0B1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.53■□□□□ 0.721e-6■■■■□ 20.1
FTOQ9C0B1 PDHA1-205ENST00000417819 471 ntTSL 317.89■□□□□ 0.451e-6■■■■□ 20.1
FTOQ9C0B1 PDHA1-201ENST00000355808 699 ntTSL 317.89■□□□□ 0.451e-6■■■■□ 20.1
FTOQ9C0B1 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC16.09■□□□□ 0.171e-6■■■■□ 20.1
FTOQ9C0B1 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.021e-6■■■■□ 20.1
FTOQ9C0B1 PDHA1-211ENST00000492364 611 ntTSL 215.18■□□□□ 0.021e-6■■■■□ 20.1
FTOQ9C0B1 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.011e-6■■■■□ 20.1
FTOQ9C0B1 PDHA1-204ENST00000379806 3484 ntTSL 1 (best) BASIC13.16□□□□□ -0.31e-6■■■■□ 20.1
FTOQ9C0B1 EIF4G1-226ENST00000450424 2658 ntTSL 521.16■□□□□ 0.981e-8■■■■□ 20
FTOQ9C0B1 EIF4G1-208ENST00000413967 2808 ntTSL 219.55■□□□□ 0.721e-8■■■■□ 20
FTOQ9C0B1 EIF4G1-210ENST00000421110 2755 ntTSL 519.29■□□□□ 0.681e-8■■■■□ 20
FTOQ9C0B1 EIF4G1-213ENST00000426123 2907 ntTSL 217.75■□□□□ 0.431e-8■■■■□ 20
FTOQ9C0B1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.696e-9■■■■□ 19.8
FTOQ9C0B1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.61e-323■■■■□ 19.7
FTOQ9C0B1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.521e-323■■■■□ 19.7
FTOQ9C0B1 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.21e-323■■■■□ 19.7
FTOQ9C0B1 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.127e-7■■■■□ 19.7
FTOQ9C0B1 GSE1-215ENST00000635906 666 ntTSL 313.99□□□□□ -0.177e-7■■■■□ 19.7
FTOQ9C0B1 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.364e-8■■■■□ 19.6
FTOQ9C0B1 N4BP1-202ENST00000564124 2485 ntTSL 515.59■□□□□ 0.094e-8■■■■□ 19.6
FTOQ9C0B1 TMC6-209ENST00000588087 2384 ntTSL 225.42■■□□□ 1.666e-8■■■■□ 19.6
FTOQ9C0B1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.71■■□□□ 1.556e-8■■■■□ 19.6
FTOQ9C0B1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.65■■□□□ 1.226e-8■■■■□ 19.6
FTOQ9C0B1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.956e-8■■■■□ 19.6
FTOQ9C0B1 TMC6-224ENST00000593044 3070 ntTSL 218.8■□□□□ 0.66e-8■■■■□ 19.6
FTOQ9C0B1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.376e-8■■■■□ 19.6
FTOQ9C0B1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.17■■□□□ 1.465e-7■■■■□ 19.6
FTOQ9C0B1 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)21.25■□□□□ 0.995e-7■■■■□ 19.6
FTOQ9C0B1 HNF4A-207ENST00000609262 540 ntTSL 1 (best)20.34■□□□□ 0.855e-7■■■■□ 19.6
FTOQ9C0B1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.18■□□□□ 0.825e-7■■■■□ 19.6
FTOQ9C0B1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.44■□□□□ 0.385e-7■■■■□ 19.6
FTOQ9C0B1 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC14.91□□□□□ -0.025e-7■■■■□ 19.6
FTOQ9C0B1 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC14.76□□□□□ -0.055e-7■■■■□ 19.6
FTOQ9C0B1 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC12.17□□□□□ -0.465e-7■■■■□ 19.6
FTOQ9C0B1 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.495e-7■■■■□ 19.6
FTOQ9C0B1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.65■■□□□ 1.064e-7■■■■□ 19.6
FTOQ9C0B1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.274e-7■■■■□ 19.6
FTOQ9C0B1 KDM4B-207ENST00000588961 560 ntTSL 49.85□□□□□ -0.834e-6■■■■□ 19.5
FTOQ9C0B1 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.71■□□□□ 0.275e-7■■■■□ 19.5
FTOQ9C0B1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.412e-6■■■■□ 19.3
FTOQ9C0B1 C20orf24-205ENST00000491113 734 ntTSL 229.2■■■□□ 2.263e-6■■■■□ 19.3
FTOQ9C0B1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28■■■□□ 2.073e-6■■■■□ 19.3
FTOQ9C0B1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.79■■■□□ 2.043e-6■■■■□ 19.3
FTOQ9C0B1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.043e-6■■■■□ 19.3
FTOQ9C0B1 C20orf24-206ENST00000492721 1044 ntTSL 225.35■■□□□ 1.653e-6■■■■□ 19.3
FTOQ9C0B1 HYOU1-203ENST00000527038 629 ntTSL 225.29■■□□□ 1.649e-12■■■■□ 19.3
FTOQ9C0B1 HYOU1-201ENST00000526354 568 ntTSL 225.06■■□□□ 1.69e-12■■■■□ 19.3
FTOQ9C0B1 HYOU1-214ENST00000534233 711 ntTSL 224.43■■□□□ 1.59e-12■■■■□ 19.3
FTOQ9C0B1 NCLN-204ENST00000588428 1080 ntTSL 523.87■■□□□ 1.412e-6■■■■□ 19.3
FTOQ9C0B1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.49■■□□□ 1.352e-6■■■■□ 19.3
FTOQ9C0B1 BCAR1-213ENST00000563323 558 ntTSL 323.45■■□□□ 1.342e-6■■■■□ 19.3
FTOQ9C0B1 HYOU1-206ENST00000530467 552 ntTSL 422.72■■□□□ 1.239e-12■■■■□ 19.3
FTOQ9C0B1 HYOU1-211ENST00000532421 582 ntTSL 221.63■■□□□ 1.059e-12■■■■□ 19.3
FTOQ9C0B1 HYOU1-205ENST00000529174 549 ntTSL 421.22■□□□□ 0.999e-12■■■■□ 19.3
FTOQ9C0B1 C20orf24-204ENST00000483815 1170 ntTSL 1 (best)21.05■□□□□ 0.963e-6■■■■□ 19.3
FTOQ9C0B1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.932e-6■■■■□ 19.3
FTOQ9C0B1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.882e-6■■■■□ 19.3
FTOQ9C0B1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.842e-6■■■■□ 19.3
FTOQ9C0B1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.53■□□□□ 0.722e-6■■■■□ 19.3
FTOQ9C0B1 SRRT-204ENST00000448764 1607 ntTSL 519.45■□□□□ 0.72e-6■■■■□ 19.3
FTOQ9C0B1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.17■□□□□ 0.662e-6■■■■□ 19.3
FTOQ9C0B1 BCAR1-215ENST00000564028 558 ntTSL 418.54■□□□□ 0.562e-6■■■■□ 19.3
FTOQ9C0B1 HYOU1-222ENST00000622474 549 ntTSL 218.47■□□□□ 0.559e-12■■■■□ 19.3
FTOQ9C0B1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.512e-6■■■■□ 19.3
FTOQ9C0B1 PRPF40A-212ENST00000545856 1358 ntTSL 1 (best)18.09■□□□□ 0.492e-6■■■■□ 19.3
FTOQ9C0B1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.483e-6■■■■□ 19.3
FTOQ9C0B1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.452e-6■■■■□ 19.3
FTOQ9C0B1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.42e-6■■■■□ 19.3
FTOQ9C0B1 HYOU1-216ENST00000610597 491 ntTSL 417.31■□□□□ 0.369e-12■■■■□ 19.3
FTOQ9C0B1 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.362e-6■■■■□ 19.3
FTOQ9C0B1 BCAR1-221ENST00000569006 574 ntTSL 417■□□□□ 0.312e-6■■■■□ 19.3
FTOQ9C0B1 PRPF40A-201ENST00000354363 1622 ntTSL 216.8■□□□□ 0.282e-6■■■■□ 19.3
FTOQ9C0B1 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.74■□□□□ 0.272e-6■■■■□ 19.3
FTOQ9C0B1 BCAR1-220ENST00000568864 556 ntTSL 416.68■□□□□ 0.262e-6■■■■□ 19.3
FTOQ9C0B1 HYOU1-210ENST00000531968 550 ntTSL 416.28■□□□□ 0.29e-12■■■■□ 19.3
FTOQ9C0B1 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.152e-6■■■■□ 19.3
FTOQ9C0B1 MLLT10-207ENST00000430455 184 ntTSL 1 (best)15.98■□□□□ 0.152e-6■■■■□ 19.3
FTOQ9C0B1 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.112e-6■■■■□ 19.3
FTOQ9C0B1 SRRT-206ENST00000460194 575 ntTSL 215.46■□□□□ 0.072e-6■■■■□ 19.3
FTOQ9C0B1 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.042e-6■■■■□ 19.3
FTOQ9C0B1 BCAR1-211ENST00000562556 4659 ntTSL 214.85□□□□□ -0.032e-6■■■■□ 19.3
FTOQ9C0B1 KAT2A-202ENST00000465682 2990 ntTSL 514.82□□□□□ -0.042e-6■■■■□ 19.3
Retrieved 100 of 7,068 protein–RNA pairs in 37.7 ms