Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CNTNAP4Q9C0A0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.17■■■□□ 2.58
CNTNAP4Q9C0A0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CNTNAP4Q9C0A0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CNTNAP4Q9C0A0 AC022616.5-201ENST00000518796 181 ntBASIC31.16■■■□□ 2.58
CNTNAP4Q9C0A0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.16■■■□□ 2.58
CNTNAP4Q9C0A0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.15■■■□□ 2.58
CNTNAP4Q9C0A0 AC008406.3-201ENST00000620001 1374 ntBASIC31.15■■■□□ 2.58
CNTNAP4Q9C0A0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CNTNAP4Q9C0A0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CNTNAP4Q9C0A0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
CNTNAP4Q9C0A0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CNTNAP4Q9C0A0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.14■■■□□ 2.58
CNTNAP4Q9C0A0 KRT125P-201ENST00000546827 989 ntBASIC31.14■■■□□ 2.58
CNTNAP4Q9C0A0 MIR4787-201ENST00000607364 84 ntBASIC31.14■■■□□ 2.58
CNTNAP4Q9C0A0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CNTNAP4Q9C0A0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CNTNAP4Q9C0A0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.13■■■□□ 2.57
CNTNAP4Q9C0A0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.13■■■□□ 2.57
CNTNAP4Q9C0A0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CNTNAP4Q9C0A0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
CNTNAP4Q9C0A0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.12■■■□□ 2.57
CNTNAP4Q9C0A0 BX664725.1-201ENST00000438252 379 ntBASIC31.12■■■□□ 2.57
CNTNAP4Q9C0A0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CNTNAP4Q9C0A0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.11■■■□□ 2.57
CNTNAP4Q9C0A0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
CNTNAP4Q9C0A0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
CNTNAP4Q9C0A0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
CNTNAP4Q9C0A0 UNC93B8-201ENST00000511903 705 ntBASIC31.11■■■□□ 2.57
CNTNAP4Q9C0A0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.11■■■□□ 2.57
CNTNAP4Q9C0A0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CNTNAP4Q9C0A0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.1■■■□□ 2.57
CNTNAP4Q9C0A0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.1■■■□□ 2.57
CNTNAP4Q9C0A0 KRT18P10-201ENST00000388836 1287 ntBASIC31.09■■■□□ 2.57
CNTNAP4Q9C0A0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CNTNAP4Q9C0A0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
CNTNAP4Q9C0A0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
CNTNAP4Q9C0A0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.08■■■□□ 2.57
CNTNAP4Q9C0A0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CNTNAP4Q9C0A0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CNTNAP4Q9C0A0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CNTNAP4Q9C0A0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31.07■■■□□ 2.56
CNTNAP4Q9C0A0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.07■■■□□ 2.56
CNTNAP4Q9C0A0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
CNTNAP4Q9C0A0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CNTNAP4Q9C0A0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CNTNAP4Q9C0A0 KRT18P24-201ENST00000344739 1156 ntBASIC31.06■■■□□ 2.56
CNTNAP4Q9C0A0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.06■■■□□ 2.56
CNTNAP4Q9C0A0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.06■■■□□ 2.56
CNTNAP4Q9C0A0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.05■■■□□ 2.56
CNTNAP4Q9C0A0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CNTNAP4Q9C0A0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.05■■■□□ 2.56
CNTNAP4Q9C0A0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CNTNAP4Q9C0A0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
CNTNAP4Q9C0A0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.04■■■□□ 2.56
CNTNAP4Q9C0A0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CNTNAP4Q9C0A0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CNTNAP4Q9C0A0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CNTNAP4Q9C0A0 KRT16P3-201ENST00000439127 1283 ntBASIC31.03■■■□□ 2.56
CNTNAP4Q9C0A0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.03■■■□□ 2.56
CNTNAP4Q9C0A0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.03■■■□□ 2.56
CNTNAP4Q9C0A0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CNTNAP4Q9C0A0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CNTNAP4Q9C0A0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.56
CNTNAP4Q9C0A0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CNTNAP4Q9C0A0 MIR935-201ENST00000401179 91 ntBASIC31■■■□□ 2.55
CNTNAP4Q9C0A0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
CNTNAP4Q9C0A0 AC137630.3-201ENST00000607245 391 ntBASIC31■■■□□ 2.55
CNTNAP4Q9C0A0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.99■■■□□ 2.55
CNTNAP4Q9C0A0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.99■■■□□ 2.55
CNTNAP4Q9C0A0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
CNTNAP4Q9C0A0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CNTNAP4Q9C0A0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.99■■■□□ 2.55
CNTNAP4Q9C0A0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.98■■■□□ 2.55
CNTNAP4Q9C0A0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
CNTNAP4Q9C0A0 AL449106.1-201ENST00000608517 1980 ntBASIC30.97■■■□□ 2.55
CNTNAP4Q9C0A0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.97■■■□□ 2.55
CNTNAP4Q9C0A0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CNTNAP4Q9C0A0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CNTNAP4Q9C0A0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CNTNAP4Q9C0A0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.97■■■□□ 2.55
CNTNAP4Q9C0A0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CNTNAP4Q9C0A0 AC021242.3-201ENST00000607598 1377 ntBASIC30.96■■■□□ 2.55
CNTNAP4Q9C0A0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CNTNAP4Q9C0A0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.96■■■□□ 2.55
CNTNAP4Q9C0A0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CNTNAP4Q9C0A0 ABCB10P1-201ENST00000614297 2181 ntBASIC30.95■■■□□ 2.55
CNTNAP4Q9C0A0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
CNTNAP4Q9C0A0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.95■■■□□ 2.54
CNTNAP4Q9C0A0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.54
CNTNAP4Q9C0A0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.95■■■□□ 2.54
CNTNAP4Q9C0A0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
CNTNAP4Q9C0A0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CNTNAP4Q9C0A0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CNTNAP4Q9C0A0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CNTNAP4Q9C0A0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
CNTNAP4Q9C0A0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.93■■■□□ 2.54
CNTNAP4Q9C0A0 AC120024.1-201ENST00000562672 995 ntBASIC30.93■■■□□ 2.54
CNTNAP4Q9C0A0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CNTNAP4Q9C0A0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms