Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.24■■□□□ 1.47
LYSMD1Q96S90 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LYSMD1Q96S90 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LYSMD1Q96S90 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LYSMD1Q96S90 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LYSMD1Q96S90 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LYSMD1Q96S90 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LYSMD1Q96S90 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LYSMD1Q96S90 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
LYSMD1Q96S90 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
LYSMD1Q96S90 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LYSMD1Q96S90 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
LYSMD1Q96S90 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.23■■□□□ 1.47
LYSMD1Q96S90 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
LYSMD1Q96S90 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.23■■□□□ 1.47
LYSMD1Q96S90 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LYSMD1Q96S90 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
LYSMD1Q96S90 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LYSMD1Q96S90 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LYSMD1Q96S90 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.22■■□□□ 1.47
LYSMD1Q96S90 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.22■■□□□ 1.47
LYSMD1Q96S90 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.22■■□□□ 1.47
LYSMD1Q96S90 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
LYSMD1Q96S90 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
LYSMD1Q96S90 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
LYSMD1Q96S90 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
LYSMD1Q96S90 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
LYSMD1Q96S90 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.21■■□□□ 1.47
LYSMD1Q96S90 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LYSMD1Q96S90 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.21■■□□□ 1.47
LYSMD1Q96S90 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
LYSMD1Q96S90 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.2■■□□□ 1.46
LYSMD1Q96S90 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
LYSMD1Q96S90 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LYSMD1Q96S90 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LYSMD1Q96S90 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.19■■□□□ 1.46
LYSMD1Q96S90 AC092803.2-201ENST00000564287 1899 ntBASIC24.18■■□□□ 1.46
LYSMD1Q96S90 AC129492.7-201ENST00000622992 756 ntBASIC24.18■■□□□ 1.46
LYSMD1Q96S90 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LYSMD1Q96S90 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LYSMD1Q96S90 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LYSMD1Q96S90 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LYSMD1Q96S90 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.17■■□□□ 1.46
LYSMD1Q96S90 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
LYSMD1Q96S90 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LYSMD1Q96S90 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LYSMD1Q96S90 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LYSMD1Q96S90 SPCS2P3-201ENST00000500401 656 ntBASIC24.16■■□□□ 1.46
LYSMD1Q96S90 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LYSMD1Q96S90 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
LYSMD1Q96S90 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LYSMD1Q96S90 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.15■■□□□ 1.46
LYSMD1Q96S90 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LYSMD1Q96S90 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LYSMD1Q96S90 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LYSMD1Q96S90 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.14■■□□□ 1.46
LYSMD1Q96S90 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LYSMD1Q96S90 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
LYSMD1Q96S90 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.14■■□□□ 1.45
LYSMD1Q96S90 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
LYSMD1Q96S90 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.13■■□□□ 1.45
LYSMD1Q96S90 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LYSMD1Q96S90 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LYSMD1Q96S90 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.13■■□□□ 1.45
LYSMD1Q96S90 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LYSMD1Q96S90 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
LYSMD1Q96S90 AC091060.1-201ENST00000623524 1766 ntBASIC24.12■■□□□ 1.45
LYSMD1Q96S90 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LYSMD1Q96S90 DUX4L9-201ENST00000449051 1259 ntBASIC24.12■■□□□ 1.45
LYSMD1Q96S90 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.12■■□□□ 1.45
LYSMD1Q96S90 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.12■■□□□ 1.45
LYSMD1Q96S90 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.12■■□□□ 1.45
LYSMD1Q96S90 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
LYSMD1Q96S90 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.12■■□□□ 1.45
LYSMD1Q96S90 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
LYSMD1Q96S90 AC010501.1-201ENST00000606270 1962 ntBASIC24.11■■□□□ 1.45
LYSMD1Q96S90 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LYSMD1Q96S90 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LYSMD1Q96S90 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LYSMD1Q96S90 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.11■■□□□ 1.45
LYSMD1Q96S90 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.11■■□□□ 1.45
LYSMD1Q96S90 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.1■■□□□ 1.45
LYSMD1Q96S90 AC012354.3-201ENST00000623734 483 ntBASIC24.1■■□□□ 1.45
LYSMD1Q96S90 DUSP8P4-201ENST00000399538 1761 ntBASIC24.1■■□□□ 1.45
LYSMD1Q96S90 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
LYSMD1Q96S90 ERN1-208ENST00000606895 2068 ntBASIC24.1■■□□□ 1.45
LYSMD1Q96S90 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.1■■□□□ 1.45
LYSMD1Q96S90 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.1■■□□□ 1.45
LYSMD1Q96S90 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LYSMD1Q96S90 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LYSMD1Q96S90 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.1■■□□□ 1.45
LYSMD1Q96S90 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.09■■□□□ 1.45
LYSMD1Q96S90 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.09■■□□□ 1.45
LYSMD1Q96S90 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
LYSMD1Q96S90 KRT18P10-201ENST00000388836 1287 ntBASIC24.09■■□□□ 1.45
LYSMD1Q96S90 AC018755.3-202ENST00000596210 929 ntBASIC24.09■■□□□ 1.45
LYSMD1Q96S90 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
LYSMD1Q96S90 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
LYSMD1Q96S90 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.09■■□□□ 1.45
LYSMD1Q96S90 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms