Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 DUX4L9-201ENST00000449051 1259 ntBASIC32.54■■■□□ 2.8
CFAP53Q96M91 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CFAP53Q96M91 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP53Q96M91 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC32.53■■■□□ 2.8
CFAP53Q96M91 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP53Q96M91 SPCS2P3-201ENST00000500401 656 ntBASIC32.53■■■□□ 2.8
CFAP53Q96M91 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CFAP53Q96M91 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC32.52■■■□□ 2.8
CFAP53Q96M91 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CFAP53Q96M91 TSPY13P-201ENST00000338964 914 ntBASIC32.52■■■□□ 2.8
CFAP53Q96M91 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
CFAP53Q96M91 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.51■■■□□ 2.79
CFAP53Q96M91 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
CFAP53Q96M91 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CFAP53Q96M91 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC32.51■■■□□ 2.79
CFAP53Q96M91 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
CFAP53Q96M91 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CFAP53Q96M91 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC32.5■■■□□ 2.79
CFAP53Q96M91 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC32.5■■■□□ 2.79
CFAP53Q96M91 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC32.5■■■□□ 2.79
CFAP53Q96M91 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC32.49■■■□□ 2.79
CFAP53Q96M91 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CFAP53Q96M91 AL033527.3-201ENST00000566366 1196 ntBASIC32.49■■■□□ 2.79
CFAP53Q96M91 AC018755.3-202ENST00000596210 929 ntBASIC32.49■■■□□ 2.79
CFAP53Q96M91 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CFAP53Q96M91 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CFAP53Q96M91 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC32.48■■■□□ 2.79
CFAP53Q96M91 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CFAP53Q96M91 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
CFAP53Q96M91 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC32.47■■■□□ 2.79
CFAP53Q96M91 MIR6765-201ENST00000614092 87 ntBASIC32.47■■■□□ 2.79
CFAP53Q96M91 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC32.47■■■□□ 2.79
CFAP53Q96M91 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CFAP53Q96M91 DUX4L18-201ENST00000553347 1267 ntBASIC32.46■■■□□ 2.79
CFAP53Q96M91 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CFAP53Q96M91 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
CFAP53Q96M91 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CFAP53Q96M91 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC32.44■■■□□ 2.78
CFAP53Q96M91 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
CFAP53Q96M91 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CFAP53Q96M91 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC32.43■■■□□ 2.78
CFAP53Q96M91 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC32.43■■■□□ 2.78
CFAP53Q96M91 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
CFAP53Q96M91 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC32.43■■■□□ 2.78
CFAP53Q96M91 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CFAP53Q96M91 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
CFAP53Q96M91 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.42■■■□□ 2.78
CFAP53Q96M91 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC32.42■■■□□ 2.78
CFAP53Q96M91 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CFAP53Q96M91 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CFAP53Q96M91 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CFAP53Q96M91 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
CFAP53Q96M91 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
CFAP53Q96M91 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC32.41■■■□□ 2.78
CFAP53Q96M91 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC32.41■■■□□ 2.78
CFAP53Q96M91 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP53Q96M91 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP53Q96M91 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC32.4■■■□□ 2.78
CFAP53Q96M91 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
CFAP53Q96M91 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP53Q96M91 GUK1-208ENST00000366728 842 ntTSL 2 BASIC32.4■■■□□ 2.78
CFAP53Q96M91 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC32.4■■■□□ 2.78
CFAP53Q96M91 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC32.4■■■□□ 2.78
CFAP53Q96M91 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC32.4■■■□□ 2.78
CFAP53Q96M91 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CFAP53Q96M91 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
CFAP53Q96M91 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CFAP53Q96M91 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CFAP53Q96M91 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC32.39■■■□□ 2.78
CFAP53Q96M91 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
CFAP53Q96M91 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
CFAP53Q96M91 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
CFAP53Q96M91 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC32.38■■■□□ 2.77
CFAP53Q96M91 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC32.38■■■□□ 2.77
CFAP53Q96M91 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP53Q96M91 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC32.37■■■□□ 2.77
CFAP53Q96M91 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
CFAP53Q96M91 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP53Q96M91 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP53Q96M91 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC32.37■■■□□ 2.77
CFAP53Q96M91 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP53Q96M91 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CFAP53Q96M91 IDNK-203ENST00000405990 629 ntTSL 2 BASIC32.36■■■□□ 2.77
CFAP53Q96M91 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CFAP53Q96M91 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CFAP53Q96M91 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC32.35■■■□□ 2.77
CFAP53Q96M91 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
CFAP53Q96M91 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CFAP53Q96M91 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CFAP53Q96M91 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CFAP53Q96M91 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC32.34■■■□□ 2.77
CFAP53Q96M91 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CFAP53Q96M91 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CFAP53Q96M91 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CFAP53Q96M91 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC32.33■■■□□ 2.77
CFAP53Q96M91 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CFAP53Q96M91 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC32.33■■■□□ 2.77
CFAP53Q96M91 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC32.33■■■□□ 2.77
CFAP53Q96M91 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC32.33■■■□□ 2.77
CFAP53Q96M91 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms