Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.61■□□□□ 0.41
CHCHD1Q96BP2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD1Q96BP2 DYNLL1-208ENST00000550178 581 ntBASIC17.61■□□□□ 0.41
CHCHD1Q96BP2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD1Q96BP2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD1Q96BP2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD1Q96BP2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD1Q96BP2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CHCHD1Q96BP2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHCHD1Q96BP2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD1Q96BP2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD1Q96BP2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD1Q96BP2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD1Q96BP2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD1Q96BP2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CHCHD1Q96BP2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CHCHD1Q96BP2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD1Q96BP2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD1Q96BP2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.6■□□□□ 0.41
CHCHD1Q96BP2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD1Q96BP2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CHCHD1Q96BP2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHCHD1Q96BP2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD1Q96BP2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD1Q96BP2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD1Q96BP2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD1Q96BP2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD1Q96BP2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHCHD1Q96BP2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CHCHD1Q96BP2 AC096887.2-201ENST00000623443 1957 ntBASIC17.59■□□□□ 0.41
CHCHD1Q96BP2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.58■□□□□ 0.41
CHCHD1Q96BP2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.58■□□□□ 0.41
CHCHD1Q96BP2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHCHD1Q96BP2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHCHD1Q96BP2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHCHD1Q96BP2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
CHCHD1Q96BP2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD1Q96BP2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD1Q96BP2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD1Q96BP2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD1Q96BP2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.58■□□□□ 0.4
CHCHD1Q96BP2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CHCHD1Q96BP2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD1Q96BP2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHCHD1Q96BP2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD1Q96BP2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD1Q96BP2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD1Q96BP2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD1Q96BP2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD1Q96BP2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.57■□□□□ 0.4
CHCHD1Q96BP2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD1Q96BP2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHCHD1Q96BP2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD1Q96BP2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD1Q96BP2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD1Q96BP2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD1Q96BP2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHCHD1Q96BP2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.56■□□□□ 0.4
CHCHD1Q96BP2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHCHD1Q96BP2 AP003733.4-201ENST00000623785 1697 ntBASIC17.55■□□□□ 0.4
CHCHD1Q96BP2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHCHD1Q96BP2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.55■□□□□ 0.4
CHCHD1Q96BP2 AC006077.2-201ENST00000623591 457 ntBASIC17.55■□□□□ 0.4
CHCHD1Q96BP2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHCHD1Q96BP2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHCHD1Q96BP2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHCHD1Q96BP2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHCHD1Q96BP2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHCHD1Q96BP2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHCHD1Q96BP2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHCHD1Q96BP2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHCHD1Q96BP2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHCHD1Q96BP2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHCHD1Q96BP2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHCHD1Q96BP2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CHCHD1Q96BP2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHCHD1Q96BP2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHCHD1Q96BP2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.52■□□□□ 0.4
CHCHD1Q96BP2 AL031258.1-201ENST00000623562 325 ntBASIC17.52■□□□□ 0.4
CHCHD1Q96BP2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHCHD1Q96BP2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CHCHD1Q96BP2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.51■□□□□ 0.39
CHCHD1Q96BP2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.51■□□□□ 0.39
CHCHD1Q96BP2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHCHD1Q96BP2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHCHD1Q96BP2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.51■□□□□ 0.39
CHCHD1Q96BP2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHCHD1Q96BP2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.51■□□□□ 0.39
CHCHD1Q96BP2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHCHD1Q96BP2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHCHD1Q96BP2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHCHD1Q96BP2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHCHD1Q96BP2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHCHD1Q96BP2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHCHD1Q96BP2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHCHD1Q96BP2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CHCHD1Q96BP2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHCHD1Q96BP2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHCHD1Q96BP2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHCHD1Q96BP2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 1038.8 ms